Gene Huta_1276 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHuta_1276 
Symbol 
ID8383551 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhabdus utahensis DSM 12940 
KingdomArchaea 
Replicon accessionNC_013158 
Strand+ 
Start bp1247143 
End bp1247829 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content65% 
IMG OID644972335 
ProductTrkA-N domain protein 
Protein accessionYP_003130185 
Protein GI257052352 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0569] K+ transport systems, NAD-binding component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.283168 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGATTCG TTATCGTGGG TTCCGGTCGC GTCGGACTCC GGACGGCCCG GGCACTCGAC 
GAGAGCGGCC ACGAGGTTGT CCTCGTCGAG GCCGATCCGA AGACTGCCGA CCGGGGGCGC 
GAAGCAGGGT TCGAGGTGAT CCACGGAGAC GGTTCCCTCG AACCTGTTCT CGAACAGACG 
GATCTCGAAT CGGCGGACGC CGTCGGCGCA CTCACGGGTG ATCTCAACGC CAACTTCGCT 
ACCTGTCTGA TCGCCAGCGA GCACGGCTGT CGGACGGTGT TACGGATAGA CGAAGACTAC 
CGCGAGGACA TCTACCGGCA GTACGCCGAC GCCGTCGATG AGGTGATCTA CCCCGAGCGA 
CTCGGCGCGA TCGCGACGAA AAACGCCCTG CTCGGAGGCA ACAGCGTCGC GATCGCGGAC 
ATCGCCCAGC ACCTCCAGTT GATCCAGTTC ACCGTCACCG CCGACGCGCC GGTCAACGGC 
TACAGCCTGA GCGAACTCGA ACTGCCGGCC AACGCGCGGC TACTCGCCTT CGGCAAGCAG 
GACGACCCGG TCGACGTGCC GAACGTCGAC GCGTCCCTGG AGGTCGGCGA TCGATTGGTC 
GTCCTCGCGG ATTTCACCGT TCTCGGGGAC GTCCGACAGT TGATCGTGGG CGAACAGACT 
CCACAGCAAG CACTCGGAGG TGCCTGA
 
Protein sequence
MRFVIVGSGR VGLRTARALD ESGHEVVLVE ADPKTADRGR EAGFEVIHGD GSLEPVLEQT 
DLESADAVGA LTGDLNANFA TCLIASEHGC RTVLRIDEDY REDIYRQYAD AVDEVIYPER 
LGAIATKNAL LGGNSVAIAD IAQHLQLIQF TVTADAPVNG YSLSELELPA NARLLAFGKQ 
DDPVDVPNVD ASLEVGDRLV VLADFTVLGD VRQLIVGEQT PQQALGGA