| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_1244 |
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| Symbol | |
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| ID | 8383519 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhabdus utahensis DSM 12940 |
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| Kingdom | Archaea |
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| Replicon accession | NC_013158 |
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| Strand | + |
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| Start bp | 1216792 |
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| End bp | 1218558 |
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| Gene Length | 1767 bp |
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| Protein Length | 588 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644972303 |
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| Product | extracellular solute-binding protein family 5 |
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| Protein accession | YP_003130153 |
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| Protein GI | 257052320 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.863592 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACTCCT CGGATACGCC CAGTGGTCTC TCCCGCCGCA GTCTACTTGG CGGTGCCAGC
GCTGGCTTCG CCGCTTCGAG TGCCGGCTGC CTCCAGTACG CCCGCAGTCT CGTCGATCGA
GAGTCCCCCA AGCAGGTGTC AGTGCGGATC AAGACTGTCC CGGCAGACGA AGACGAAGCA
GCGGTCCAGA TTGCACGGGC CTTGCAGAAA AACATGGAGA CGGTCGGCAT CGACGCGTCG
ATCGTCCTGA TGACCGGAGC AGAGCTGCTT CGGGACGTGC TCCTCAACGA ATCGTTCGAC
ATCTACGTGA GTCAGTACCC CTCACATCAC GATCCTGATT TCCTGCGACC GGCGCTACAC
TCGACGTTCG TCACCGAGCA GGGATGGCAA AATCCGTTCG GCATCTCCGA TCTCGATCTC
GACGAGCAGT TGACCGAACA GCGAACGGCC GTCGGAGCGG AGCGACAGCG TGCCGTCGCC
GGCGTCGTCG GGTCCGTCAC GGAGATCCAG CCGTTCGCGA TGGTGTGTTT CCCCACGCGA
ATCACCGTCG TCCGAAACGA CCGCTTCACC AACTGGAACG GCCTTGAGGA CCCGATCAAC
TACCTGGCGT TGCGACGGAC CGAAGACGCC CCCGACGGCG AACCCACGCT CCGGATCGCG
TTAACGGACG ACCGAATCAC GAAGAACTAC AATCCCCTTG CCGTGGAGTA CAGGCGGCCG
AACCCCCTGA CTGACCTCCT TTACGATCCA CTCGCTCGCC GTTCCGATGG AGAGATCCAA
CCCTGGCTGG CTGGTGACGT CACGTGGCAG TGGACCGAGG ACACAGCCGT GACGGCGACC
GTCAAACTCC GGGACGGGCT GACCTGGCAC GACGGCCAAC CCCTGACCGC AGCCGACGTC
GCCTTTACGT ACCGATTCCT CGACGACACG AGCCTCGGGA CAGGAAACAT GAACGTCCCC
TCGCCCCGGT TTCGGGGGCG GACCTCACTG GTCGAGTCGG TCGAACGCCT CGACGCCCAG
ACAGTCCGGT TGGAGTTCGG TGACACGGCG GAAGCCGTCG CGGCCCGTGC GCTGACTGTC
CCGATCCTGC CGTCGCACGT CTGGGAGGAA AAATCAGCGG CCACGAACAT CGCCGGCATC
AACATTTCCG AAGGAGTCAC GCAAGCACTG ACCTGGGCCA ACCCCGATCC GGTGGGAAGC
GGCCCGTTGC GATTCGAGTC TCGGACGCCG GGGGAGCGGG TCGTATTCTC GCGGTTCGAC
GACCACGTTC TGGTCGGTGG TGGCCCGGAC CGCGTTTCCG TCCCCTTCGA ACGCTTCGTC
GTCCAGATCG CGCCGTCGGA CACGGCAGCA GTCTCACTGG TTACCGACAG CACGGTCGAC
GCAACCGGCG ATCCGATCCA CCCGAAGGTT CTCGACAGGG TGACCGAAAA CGACCCCATT
GAGGTCCTCT TCGGGAACTC ACGGTCGTTC TATCACGTCG GATTCAACAC GCGGCGTGAG
CCGTTCGGCA ACGTCCGGTT TCGGCAAGCA GTCGCCCGAC TCCTCGACGC CGAACACATC
GCCTCGTCGG TGTTCGACGG CCATGCCACG CCAGCAGCGA CGCCCCTGGC CGGCACCGAC
TGGGAGCCAC CGGAGTTCGA ATGGGACGGC ACAGATCCGG TCGTTCCCTT TGCCGGGACG
GACGGTGAAC TCGACATTTC GGACGCAAGA GGCGCGTTCA GGGAAGCCGG GTATAGGTAC
GACGGCGACG GGAGACTCCT GAAATGA
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| Protein sequence | MDSSDTPSGL SRRSLLGGAS AGFAASSAGC LQYARSLVDR ESPKQVSVRI KTVPADEDEA
AVQIARALQK NMETVGIDAS IVLMTGAELL RDVLLNESFD IYVSQYPSHH DPDFLRPALH
STFVTEQGWQ NPFGISDLDL DEQLTEQRTA VGAERQRAVA GVVGSVTEIQ PFAMVCFPTR
ITVVRNDRFT NWNGLEDPIN YLALRRTEDA PDGEPTLRIA LTDDRITKNY NPLAVEYRRP
NPLTDLLYDP LARRSDGEIQ PWLAGDVTWQ WTEDTAVTAT VKLRDGLTWH DGQPLTAADV
AFTYRFLDDT SLGTGNMNVP SPRFRGRTSL VESVERLDAQ TVRLEFGDTA EAVAARALTV
PILPSHVWEE KSAATNIAGI NISEGVTQAL TWANPDPVGS GPLRFESRTP GERVVFSRFD
DHVLVGGGPD RVSVPFERFV VQIAPSDTAA VSLVTDSTVD ATGDPIHPKV LDRVTENDPI
EVLFGNSRSF YHVGFNTRRE PFGNVRFRQA VARLLDAEHI ASSVFDGHAT PAATPLAGTD
WEPPEFEWDG TDPVVPFAGT DGELDISDAR GAFREAGYRY DGDGRLLK
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