| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_1159 |
|---|
| Symbol | |
|---|
| ID | 8383434 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorhabdus utahensis DSM 12940 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013158 |
|---|
| Strand | - |
|---|
| Start bp | 1134385 |
|---|
| End bp | 1135353 |
|---|
| Gene Length | 969 bp |
|---|
| Protein Length | 322 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 644972218 |
|---|
| Product | GTP-binding protein HSR1-related |
|---|
| Protein accession | YP_003130068 |
|---|
| Protein GI | 257052235 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1084] Predicted GTPase |
|---|
| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCATC CCTTCGAGAC CCTCCCGACG ACTCCCACGT CGGAGGAACT CATCGACCAG
GCGTTCTCGC GGGCCGCCCG GGCCGGCCGG GCCAAGTCCG GTCACGACGC CCAGCAGTCG
ATGCTCCAGA CCGCCGCGAA CGTCCTCTCG GACAACCTCG AGAACGTCGT CACCCAATGG
CCCGACTTCG ACACTCTCGA CCCGTTCTAC CGCGAACTCG CCGACGCCGA ACACGGTGTT
GACGAGTTAC GCCAGCACCT TTCGGAAGTG ACGTGGGCGA GTCGCAAGAC CAGCGACATC
CGTGACGAGT ACCAGTCCCG GCTTCGGGGC GTCGACGTCG ACGGCGCGCG CAAACTCCGC
AAGCAGGCGT TCGCCCGCCT GGCCGACATC ACCCGTCAGG TGGACGAGAA CCTCGCGGCG
CTGGCCGATG CCCGCCAGGA GCTTCGAAAA CTGCCGGATA TCAAACCCGA CGAACCGGTG
ATCGTCATCG CGGGCTACCC GAACGTCGGG AAGTCCTCGT TCGTCAACAG CGTGACGCGG
GCCGACAACG AGATCGCCGC CTATCCGTTC ACGACCACCC AGATTCACGT CGGCCACATT
GAGCGCGATC ATATCCGCTA TCAACTGGTG GATACGCCGG GCCTGCTCGA TCGCCCGCCG
GCGGAGCGCA ACGCGATCGA AGCCCAGGCC GTGAGTGCGC TCGAACACCT CGCCGATGCC
GTCCTCGTGA TGGTCGACGC CAGCGGCGAG TGTGGCTTCC CGATCGACGT CCAACTCGAA
CTCAGAGACG ACATCGCTTC CCGGTTCGGC GACGCGCCCG TATTGACGGT CTGTAACAAG
GCCGATCGCT CGCGGGACGT CGCGGCCGAC CACTACATGA GCGTTACCGA GGACGACAAC
GTTGAGGGTG TCCTCGACGC GGCGATCGAC GCTGTCGGGT ACGAACCCGA ACTTCCCTTC
GAAGAATAA
|
|---|
| Protein sequence | MSHPFETLPT TPTSEELIDQ AFSRAARAGR AKSGHDAQQS MLQTAANVLS DNLENVVTQW
PDFDTLDPFY RELADAEHGV DELRQHLSEV TWASRKTSDI RDEYQSRLRG VDVDGARKLR
KQAFARLADI TRQVDENLAA LADARQELRK LPDIKPDEPV IVIAGYPNVG KSSFVNSVTR
ADNEIAAYPF TTTQIHVGHI ERDHIRYQLV DTPGLLDRPP AERNAIEAQA VSALEHLADA
VLVMVDASGE CGFPIDVQLE LRDDIASRFG DAPVLTVCNK ADRSRDVAAD HYMSVTEDDN
VEGVLDAAID AVGYEPELPF EE
|
|---|
| |