| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_1024 |
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| Symbol | |
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| ID | 8383297 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhabdus utahensis DSM 12940 |
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| Kingdom | Archaea |
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| Replicon accession | NC_013158 |
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| Strand | - |
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| Start bp | 989124 |
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| End bp | 991118 |
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| Gene Length | 1995 bp |
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| Protein Length | 664 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644972088 |
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| Product | DNA mismatch repair protein MutS domain protein |
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| Protein accession | YP_003129940 |
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| Protein GI | 257052107 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1193] Mismatch repair ATPase (MutS family) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.318391 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACCTGA CGGCGATCCC CGGCGTCGGC GAGAAGACCG CGGCGTCGCT TGCCGAACTC
GACGATCCAG CGGCGGCGAT CGAGAACGGC GACGTCGCGG CCGTCGCTCG GGCCCCCGGC
ATCAGTCAGG GTCGTGCCGC CCGGATCGTC CGCGCGGCGA TCCGCGAGCG CCACGGCGAC
GCGGGCGAGT TCCTGGCGAC GCCGCGCGCC CGGGAAGTGT ACCGGGACGT TCTGGAACTG
CTCGAAGCAC GCACCGTCAC CGACTACGCC GCCGCCCGCC TGGAGACGCT GTACCCCAGC
GCCAGCGATT CTCGGATCGC CGAAGTCCGC CAACTCAGCG AGCGGGCGAT CGAACGCGAT
CCCGACGAGA CCGTCCTCGA GGCGCTCGAA GACGTCGAAC CGCTGGAGCG GCCTGGCGAC
GTTCGTGTTC GGGACCGGTG TCTCGCGACG ACCGACGGCG AGACCTACGC CAGCGCCCGT
GAGGCGATCC CCGAGATGAG CGTCGAAGTC GTCGAGGACA GCCGCGATCT GGCGGAACTC
GCCCGCGGAT ACGCGACGGT CGTCGCACTG GACGATTCCT TCGCCGGCGT CGACGTCGAG
GGTGACGTCC GCGTCGAACC CGACGCCCTC GAGGATCCGG CCTCGGTCGT GCCCGAGCGC
CCGATTGCCT TTTTCGCGCA CAACCGCGAC CGCATCCTCG CGGCGATTTC CGTCCACCGG
GCAGCCGACT TCGATCCGCC GTGCGACCTC GACGCGCTCG AAGCCGCGCT GGACCGACTC
GACGCGGAGG GGACGCCGAC CGGTGACGAC GAACTAACGC GATTGCAGGC TGCCGTCAAC
GACCTCGACG CCGCCGTGAG CGAGGCCGAA TCGGTCGCCA ACGACCGCCT CCGGGAAGCG
ATCGAAGCGC AGGATGTCAC CATCGAGGGG GCGGACCTGC TCTCGCTCGT CGAGCGGGGC
GCTGGCGTCG ACGAGGTGCT CTCCCGGGAA CTGGCCGACG AGTACGACGA CGCCGTCGAA
GCGGCCCGCG AGCACGTGAT CGACACACTC GACCTGCGGG ACGTAGCTGA CATCACGAAG
CGGGCGTTCC CGGACGAACC CACGTTTCCC GTCGAGCGCG AGGAGAGCGT CGTCTCCCGA
CTCCGGGAGG AGCTCACGAC GGCCCGGGAC CGCCGGGCCG AACGGCTCAA AACCGAGCTG
GCCGACGAAC TGGCGTCGAT GCGAGAGCCG GCCGAGGATC TCGTCGATAC CGCGCTCGAA
CTGGACGTCG AACTCGCCAT CGCCCGCTTG GCTGCCGATT TCGACGCGAC GATGCCGGCA
CTCGACGGCG ACGGGATCAC GATCGAGGGG GGTCGGTCGC CGCTGCTCGA CGTGGACTTC
GTTGACGTCG AACCAGTCGA CTATGAGGTC AGCGGTGTTC GCCTCCTCTC GGGGGTGAAC
AGCGGCGGGA AGACCTCGAC GCTGGACCTG CTCGCGCTGA TTGTCATCCT CGCGCACATG
GGGCTACCGG TGCCCGCAGA CCGGGCCCGA GTCGGGCGGA TCGACGCGCT GCACTACCAC
GCCAAGACCC AGGGCACGCT GGACGCGGGG GCCTTCGAGA GCACGCTCCG ATCGTTCGGC
GAGTTGGTTA CTGACGCCGC GAACGAGGGT GAGACACTCG TGCTGGTCGA CGAGCTGGAG
AGCATCACCG AACCCGGCGC GAGCGCGAAG ATCATGGCCG GGATTCTGGA GGCGCTGGCC
GAACGCGACC AGACGGCCGT GTTCGTCTCC CACCTCGCCC GGGAGATCCG CGAGACGGCC
GATCAGGACA TCGGTGTCGA CGGCATCCAG GCACTCGGCC TCGAAGACGG CGAGTTACAG
GTCGACCGGA CGCCCCGGAA GGACACGCTG GCGCGCTCGA CGCCCGAGTT GATCGTCGAA
AAACTCGCCG ACGGCGACGA TCGCGAGGAC GGCGAGGGGA ACTTCTACGG ACGATTGCTC
GAGAAGTTCG AGTAG
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| Protein sequence | MDLTAIPGVG EKTAASLAEL DDPAAAIENG DVAAVARAPG ISQGRAARIV RAAIRERHGD
AGEFLATPRA REVYRDVLEL LEARTVTDYA AARLETLYPS ASDSRIAEVR QLSERAIERD
PDETVLEALE DVEPLERPGD VRVRDRCLAT TDGETYASAR EAIPEMSVEV VEDSRDLAEL
ARGYATVVAL DDSFAGVDVE GDVRVEPDAL EDPASVVPER PIAFFAHNRD RILAAISVHR
AADFDPPCDL DALEAALDRL DAEGTPTGDD ELTRLQAAVN DLDAAVSEAE SVANDRLREA
IEAQDVTIEG ADLLSLVERG AGVDEVLSRE LADEYDDAVE AAREHVIDTL DLRDVADITK
RAFPDEPTFP VEREESVVSR LREELTTARD RRAERLKTEL ADELASMREP AEDLVDTALE
LDVELAIARL AADFDATMPA LDGDGITIEG GRSPLLDVDF VDVEPVDYEV SGVRLLSGVN
SGGKTSTLDL LALIVILAHM GLPVPADRAR VGRIDALHYH AKTQGTLDAG AFESTLRSFG
ELVTDAANEG ETLVLVDELE SITEPGASAK IMAGILEALA ERDQTAVFVS HLAREIRETA
DQDIGVDGIQ ALGLEDGELQ VDRTPRKDTL ARSTPELIVE KLADGDDRED GEGNFYGRLL
EKFE
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