Gene Huta_0891 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHuta_0891 
Symbol 
ID8383164 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhabdus utahensis DSM 12940 
KingdomArchaea 
Replicon accessionNC_013158 
Strand
Start bp860313 
End bp861149 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content64% 
IMG OID644971955 
Productcopper ABC transporter permease 
Protein accessionYP_003129807 
Protein GI257051974 
COG category[R] General function prediction only 
COG ID[COG1277] ABC-type transport system involved in multi-copper enzyme maturation, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.210065 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCAGA CGCTGACCGT CGCGCGGAAC GACTTCCGTG ACGTTCGGCG CTCGAAACTC 
CTGTGGGGCG TGATGGGGAT CTACGTCGCG TTTACGGCGC TGATCCTCTA CGCGGAGGGG
ACAGCGTCCG AGCCTGACCT CGCCACGGCG CTGTTCGGTC AGTTCTTCAT GACGACGCTG
TTGCTGCCGC TGGTGGCGAT CGCCGGAAGC TACCTGGCGA TCGCCGGCGA GCGTGAGTCG
AACACGGTCG CGTTCCTGTT GAGCCAGCCG ACCTCGCGGG CGGCCGTCGT CGCCGGGAAG
TTCCTCTCGC GAAGTCTGCT GATCGTCGGG TCACTGCTCG TCGCGTTCGT GGTTGGCGGG
ATCATCGCCG TCGTGATGTA TCCGAGTCTG GAGCTGGGTG TGGTGGGACC GTTCGTCGTC
CTCTCGATCG TCTTCGTCGG CGCGTACGTC GGGCCGTCGG TCGCCATCTC GGCGATGACG
GACACGCGAT CGCGGGCGAT TGCGGGCGCG GCCGGGTTCT ACGTACTCAC GGACGTTCTG
ATCGTCTTCG GGAACTTCTC GCTGGTCAAC GCGCTCCGGT TCCTCTTCGC CGAGACGCTC
GGTCTGGAAC TCGGCCAGCA CTTCTACGAT TTCGTGTTCA ATCTCACACC GGCGGGCTCA
CATCTGAACA CGATGTATTT CATCTTCGAC CCGAGTACGT ATCAACAACT TCCGGCCCTG
GACGCCACCC AGCCGTTCTA CCTGAAACCC TGGTTCAGTG TCGTGATCCT GCTCGCCTGG
ACTGTCGTGC CGCTGGCGAT CGGCTACTGG CGCTTCCGGG GTGCGGAACT CGGGTGA
 
Protein sequence
MSQTLTVARN DFRDVRRSKL LWGVMGIYVA FTALILYAEG TASEPDLATA LFGQFFMTTL 
LLPLVAIAGS YLAIAGERES NTVAFLLSQP TSRAAVVAGK FLSRSLLIVG SLLVAFVVGG
IIAVVMYPSL ELGVVGPFVV LSIVFVGAYV GPSVAISAMT DTRSRAIAGA AGFYVLTDVL
IVFGNFSLVN ALRFLFAETL GLELGQHFYD FVFNLTPAGS HLNTMYFIFD PSTYQQLPAL
DATQPFYLKP WFSVVILLAW TVVPLAIGYW RFRGAELG