Gene Huta_0651 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHuta_0651 
Symbol 
ID8382919 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhabdus utahensis DSM 12940 
KingdomArchaea 
Replicon accessionNC_013158 
Strand- 
Start bp649345 
End bp650325 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content66% 
IMG OID644971714 
Product3-isopropylmalate dehydrogenase 
Protein accessionYP_003129571 
Protein GI257051738 
COG category[C] Energy production and conversion
[E] Amino acid transport and metabolism 
COG ID[COG0473] Isocitrate/isopropylmalate dehydrogenase 
TIGRFAM ID[TIGR00169] 3-isopropylmalate dehydrogenase
[TIGR02088] isopropylmalate/isohomocitrate dehydrogenases 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.443768 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGAAAC AGATCGCCGC CATTCCGGGC GACGGCATCG GTCAGGAAGT GCTCCCCGCG 
GCCATCGACG TCCTCGAAGC GCTCGATCGT GATTTCGAGT TCGTCGAGGG ACGCGCGGGC 
AACGCCGTCT ACGAACGTGA GGGCACGCCC CTGCCTGAAG AAACGCGTGA ACTCGCCCGC 
GAGGCCGACG CGACGCTGTT CGGTGCCGCG GGGGAGCTTG CGGCCGACAT CATCCTCCCG 
CTCCGCCAGG ACGTCGAGTC CTTCGCCAAC ATCCGGCCGG CTCGCGCGTA CCCCGGTGTC 
GACGCCGTCA AACCCGAGAC CGATCTGGTT TTCGTCCGGG AGAACACCCA GGGCGTCTAC 
GCCGGCTTCG AATCCGACCT TACCGATGAC GTCGCAACGT TGACGCGACT CATCACCGAG 
GATGCGTCCC GGAAGATCGC CGAGTACGGC TTCGAGTACG CCGACGAGCA CGACGCCGAC 
CGGATCACTG TCGCCCACAA GGCCAACGTG ATGCGAAAGA CCGACGGGCT GTTCGTCGAC 
ACCGCCGCCG AGGTCGCCGA GGAGATGGAT GTCGAATACG ACGAGGCGCT GATCGACGCG 
CTGGCGATGC ACCTCGTCTT GCACCCCGAG GATTACGACG TGATCGTGAC GCCGAACCTC 
GCGGGCGACG TGCTCTCGGA CCTCGCAGCG GGACTCGTCG GTGGGCTCGG CATGCTTCCG 
AGCGCCAACG TCGGCGACGA CAACGCGCTG TTCGAACCCG TCCATGGCTC GGCCCCCGAC 
ATCGCCGGTG AGGGGGTTGC CAACCCGTCG GCGATGATCC TCTCGGCCGC CATGATGCTC 
GAGTACTTCG GCTACGACGA GGACGGCCAG CGTGTCCGCA ACGCCGTCGA GACCGTGCTC 
GAAGACGGAC CGCGGACCCC TGACCTCGGT GGGGACGCCT CTACCGAGAC GTTCACCGAC 
GCCGTTCTCG AACAGCTTTG A
 
Protein sequence
MTKQIAAIPG DGIGQEVLPA AIDVLEALDR DFEFVEGRAG NAVYEREGTP LPEETRELAR 
EADATLFGAA GELAADIILP LRQDVESFAN IRPARAYPGV DAVKPETDLV FVRENTQGVY 
AGFESDLTDD VATLTRLITE DASRKIAEYG FEYADEHDAD RITVAHKANV MRKTDGLFVD 
TAAEVAEEMD VEYDEALIDA LAMHLVLHPE DYDVIVTPNL AGDVLSDLAA GLVGGLGMLP 
SANVGDDNAL FEPVHGSAPD IAGEGVANPS AMILSAAMML EYFGYDEDGQ RVRNAVETVL 
EDGPRTPDLG GDASTETFTD AVLEQL