| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_0609 |
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| Symbol | |
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| ID | 8382877 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhabdus utahensis DSM 12940 |
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| Kingdom | Archaea |
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| Replicon accession | NC_013158 |
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| Strand | - |
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| Start bp | 609121 |
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| End bp | 610599 |
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| Gene Length | 1479 bp |
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| Protein Length | 492 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644971672 |
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| Product | glutamate synthase, NADH/NADPH, small subunit |
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| Protein accession | YP_003129529 |
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| Protein GI | 257051696 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases |
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| TIGRFAM ID | [TIGR01317] glutamate synthases, NADH/NADPH, small subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0291397 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGAAC GCCACCCCGG CGGCTACCGA CAGCACCGTC GTCGCCCGAT CGGCAAGCGC
GATCCCGACG AGCGGAAAGA CGATTACGAC GAGGTCTGGG CCGAGAAGTG GGACGACGAG
CACTTAGCCG AGCAGGGCGA GCGCTGCATG GATTGTGGGA CGCCGACCTG CATGGGTGGG
TGTCCGATCG GCAACATCAT CCCCGACTGG AACGACCTGG TCCACCGTGA CGACTGGAAA
CGCGCCCTCG AACGCCTCCA CGCGACCAAC AACTTCCCCG AGTTTACGGG CTACAACTGT
CCCGCACCCT GTGAGAACTC CTGCGTGCTC GCGTACAACG ACGACCCGGT GACGATCAAG
TCGATCGAGC GAGCGATCGC CGACCGCGGT TGGGAGGAGG GCTGGATCCA GCCCGAACCG
CCCGAGCAGC GCACCGACTA CGAGGTCGCG ATCGTCGGCA GCGGGCCGGC GGGACTGTCC
GCGGCCCAGC AGCTGAATCG GGCCGGCCAC CACGTGACCG TCTTCGAACG GGCGGACGAG
ATCGGCGGGC TGATGCGCTA TGGCATCCCT GACCAGAAGT TCGCCAAGGA TCGCGTCGAG
CGGCGGGTCG ACCAGCTCCG CGAGGAAGGC ATTACGTTCG AGACGAACGC CGAAATCGGC
GGCAACGTCC CCGTCGAGCG GATCGAGGAG GACTTTGATG CCTCGGTCAT CGCGGTCGGC
TCACAGAAGC CGATCGACCT CCCGCTGCCG GGCCGTGATC TCGATGGCAT CCACTTCGCG
ATGGACTACC TGACCCAGCA GAACCGCCGC AATGCCCGCA AGGACGTCCC CGGTCCCGAT
ATCGACGCCG ACGGCAAGGA CGTGGTCGTG CTGGGCGGCG GCGATACCGG TGCGGACTGT
GTCGCGACGG CCCACCGGCA AGGGGCCGAC CAGGTCGTCC AGATCGAACT CCTGCCCAAG
CCGCCCGTCG AGCGCCCGCC GGAAAATTCC TGGCCCGACC AGCCCCAGAC CTACAAGAAG
ACCTACGCCC AGGAGGAGGG GGCGATCGAG GAATACTGCG TCGACACCAA CGCCTTCGTC
GACGCCGACG GCGACGGCGT CGTCGACACC CTGGAAGCAG ATCGGGTCAT CTGGGAGGAG
GGCGGCGAGG GACCGCCCGA AAAGAAGGTC AGCGAGGCCA ACCTGGAGAT TCCCGCGGAC
CTCGTGATCC TCGCGGTCGG CTTCGAAGCA CCCGAATCGA GTCCATTCGA ACCGCTTGGC
ATTGAACTCG AAGACGATGG GACGCTCGCG ACCGACGAGG ACATGATGAC GAGTGTCGAT
GGCGTCTTCG CCGCCGGCGA CGCCGACATG GGGCCGTCGC TGATCGTCTG GGCCATCGGC
AGCGGCCGGG ACGTCGCTCG CCACGTCGAC CTGCATCTCA CCGGCGAGAC CGACCTGCCG
CCGAGTCTGG AGACGCCGAA CGAACCGCTG GTGCAGTGA
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| Protein sequence | MTERHPGGYR QHRRRPIGKR DPDERKDDYD EVWAEKWDDE HLAEQGERCM DCGTPTCMGG
CPIGNIIPDW NDLVHRDDWK RALERLHATN NFPEFTGYNC PAPCENSCVL AYNDDPVTIK
SIERAIADRG WEEGWIQPEP PEQRTDYEVA IVGSGPAGLS AAQQLNRAGH HVTVFERADE
IGGLMRYGIP DQKFAKDRVE RRVDQLREEG ITFETNAEIG GNVPVERIEE DFDASVIAVG
SQKPIDLPLP GRDLDGIHFA MDYLTQQNRR NARKDVPGPD IDADGKDVVV LGGGDTGADC
VATAHRQGAD QVVQIELLPK PPVERPPENS WPDQPQTYKK TYAQEEGAIE EYCVDTNAFV
DADGDGVVDT LEADRVIWEE GGEGPPEKKV SEANLEIPAD LVILAVGFEA PESSPFEPLG
IELEDDGTLA TDEDMMTSVD GVFAAGDADM GPSLIVWAIG SGRDVARHVD LHLTGETDLP
PSLETPNEPL VQ
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