Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Huta_0388 |
Symbol | |
ID | 8382653 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhabdus utahensis DSM 12940 |
Kingdom | Archaea |
Replicon accession | NC_013158 |
Strand | + |
Start bp | 379705 |
End bp | 380871 |
Gene Length | 1167 bp |
Protein Length | 388 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 644971448 |
Product | ABC transporter, periplasmic binding protein, thiB subfamily |
Protein accession | YP_003129308 |
Protein GI | 257051475 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG4143] ABC-type thiamine transport system, periplasmic component |
TIGRFAM ID | [TIGR01254] ABC transporter periplasmic binding protein, thiB subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGTGAAAC GACGCACGTT TCTTCGAACG GCCGGGGTCA GTGTTCTGGG GACAACGGCA TTGTCCGGCT GTGCTGGCGA GGACGGAACC GACACGGAAC AGACAACGGA ACCGTCGTCT GAAACGACCG ATACGGTGAC GGCTGACGGA ACACCGCCCA CCGATACGAC GACCACTGAG ACAACGACGA CTAGTTCGTC TTCGACGGAC ACACTGACGG TGGCGACGTA CTCCTCGTTC ACCGGTGAGG ATACCGCCGG AAACTGGCTC AAGTCCGCCT TCGAGGCAGA GTATCCGGAC AAAACCGTCG AGTTCACGAC ACCGGAGAAC GGCCTCAATC AGTATATTCT GCGCCAACAG GAGGGTGCCG GGATCGACGC CGATCTCTAC GTTGGACTCA ATACGTCCGA ACTCGTCAGA GCCGACCAGG AAATCGATGG ATCGCTGTTT CAGACGGTCC AGGATGATCT TGCCCGGGCT GGCAACGTCA AATCGGGTCT CGAAATCGAT CCGGACGGCC GGGCGATCAC CTACGATACG GGATATATCT CGCTGGTCTA CAACGGCAAC GAGGTCCAGA ACCCGGCGAC CTTCGACGCG CTAACGAGCG ACCAATATCA GGGAGATCTT ATCGTACAGA ACGCCCAGCA GTCCGATCCC GGACGGGCGT TTCTCCTTTG GACCATCGCC CAGAAGGGAA CTGACGGCTA TCTGGAGTAC TGGCAGGATC TCGTCGATAA CGACGTGACG ATCCTCTCGG ACTGGGAACC TGCCTATCAG GCCTACATGA ACGACGAAGC GCCGATGGTG GTTTCCTATT CGACCGATCA GGTGTATTAT CACGGCGAAG GTGTCGACAT CCAGAAACAC CAGGTCGGTT TCCTGAACGA CCAGGGGTAC GCCAACCCTG AAGCGATGGC GCTGTTCGAT GACGCAGATG CCCCGGAACT CGGCCGGGAG TTCATGGACT TCGTGCTCTC CCCGAAGGCA CAGTCCGAGA TCGCCGTCCG GAACGTTCAG TTCCCCGCTG TCGAGGGCGT CGACCCCGGC GAGGAGTTCT CACAGTACGC CTACGAGCCG CCAGAGCCCG TCACCTTCAG CTACGACGAA CTGTCCGGCA ACGTCGAGGG CTGGATCGAG GACTGGGCGC GCGAGATCGT CAACTGA
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Protein sequence | MVKRRTFLRT AGVSVLGTTA LSGCAGEDGT DTEQTTEPSS ETTDTVTADG TPPTDTTTTE TTTTSSSSTD TLTVATYSSF TGEDTAGNWL KSAFEAEYPD KTVEFTTPEN GLNQYILRQQ EGAGIDADLY VGLNTSELVR ADQEIDGSLF QTVQDDLARA GNVKSGLEID PDGRAITYDT GYISLVYNGN EVQNPATFDA LTSDQYQGDL IVQNAQQSDP GRAFLLWTIA QKGTDGYLEY WQDLVDNDVT ILSDWEPAYQ AYMNDEAPMV VSYSTDQVYY HGEGVDIQKH QVGFLNDQGY ANPEAMALFD DADAPELGRE FMDFVLSPKA QSEIAVRNVQ FPAVEGVDPG EEFSQYAYEP PEPVTFSYDE LSGNVEGWIE DWAREIVN
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