Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Huta_0324 |
Symbol | |
ID | 8382588 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhabdus utahensis DSM 12940 |
Kingdom | Archaea |
Replicon accession | NC_013158 |
Strand | - |
Start bp | 312727 |
End bp | 314118 |
Gene Length | 1392 bp |
Protein Length | 463 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644971383 |
Product | RNA-binding protein AU-1 |
Protein accession | YP_003129244 |
Protein GI | 257051411 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1530] Ribonucleases G and E |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.623805 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGATG GTGAGTCGAT CGGCGTGCAG GTTCGGGGTA TCTACGCCAC AGCGATAACG CAGCGGCTGG TTCGGGCGGA CGACGTCGAT GTCGTCCAGG CCTCGACACC GATCCAACGA CGTTTCGAGA CCACGTTCGC CGAGGAACCA GCCAGCGTGA CGATCGAAAC TGACGAGCAA CGACTGGGTG TTTCGATCGT CGGAACGCAA GCCGGTGTCG AACGGGTGCG TGATGCCCTC GACGTGGCTA TCGACACGCT GTGCTGGAGG GATCCGACGC CGCAGGGGGC GATCTTCGAC GGCGTCGTCA CCGAGACACT GGGGAGCGGC GCTGTGGTCG ATCTGGGTGA TACCGAGGGC TTTCTCCCCT TCAACGCGAC CAGCGCACAC GTCGAAACCG ACGACAGACT CCGTGTCCAG GTCGCCGAAC CCGCGGCCCC CTGGAGCACG GACCGGCCGG AACTCGACAC AACCGTGTCG GTCCGCGGTG ATCTGGCCAC GCTCGTCCGG GAAGCGTCGA CCGAAGCCGC GGGGCCGGAC CTCCTTGACG TGCTCTCGGT GGACGTCCCC GACGGCTGGC GGGTCTCATG GGGGCGGGAC GCCGACGACG CCGACTTCGC GGTCCTGGAG GCCGAACTCG AACCGCTGAT CGACCGGGCC GCCGACATCG ACGACGCATT CTCAGCCCAC GACGAGACCA CGACAACCGG TCGGATCGTC GACGGTCGCG GAACGCAGTG GGTGCTCTTT GGCCGTGAAT CCCGCTTCGC TCTCGACGAG GATCGCCGGG AAGTGACGCC GACGATGCCG GGCCACCACC GGATCAAGGC GGGCGACGAA CGCGCGAGCG CCGCCGTCGA CTTCGTCGAG GACCTCGCGC CGGACCTCGA CGGTGAGTTC CCGTTCGACG TCGTGACGCG GCAGTTCGGG CCACAGGCGG GAGACCGGGT CGCCATCGCC CACGGCAAGC CCGACGGGCG GACGGTCAGC CTCGGCCGCG GCGACGTGAC CGAACGCGAC CCGGACGGCA CCATCCGCGT CGAGCGCGAG ATGTCACCCG GCGGGACCTA CGACGCGCTG GGCACAAAGC GCCGGGGTGG CGACGTCGCC GTCACGAAGT TCACCGAGGG CAAGTGGTGG TATCCGACCG TCTACCGGGG CGAGGACGGC GACAAGCGCG GGACCTACGT CAACGTCTGT ACGCCCGTGG AGGTGTTCCC GAACGAAATC CGGTACGTCG ATCTCCACGT CGACGTGGTC AAGCACACTG ACGGGACGGT CGAGCGGGTC GACGACGACG AACTCGACGC GGCGGTCGCG GCCGGCGACG TTCCCGAGGC ACTCGCCGAG AAAGCCCGCA AAGTGGCGAG CGCCGTCGAG AACGCGCTGT GA
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Protein sequence | MTDGESIGVQ VRGIYATAIT QRLVRADDVD VVQASTPIQR RFETTFAEEP ASVTIETDEQ RLGVSIVGTQ AGVERVRDAL DVAIDTLCWR DPTPQGAIFD GVVTETLGSG AVVDLGDTEG FLPFNATSAH VETDDRLRVQ VAEPAAPWST DRPELDTTVS VRGDLATLVR EASTEAAGPD LLDVLSVDVP DGWRVSWGRD ADDADFAVLE AELEPLIDRA ADIDDAFSAH DETTTTGRIV DGRGTQWVLF GRESRFALDE DRREVTPTMP GHHRIKAGDE RASAAVDFVE DLAPDLDGEF PFDVVTRQFG PQAGDRVAIA HGKPDGRTVS LGRGDVTERD PDGTIRVERE MSPGGTYDAL GTKRRGGDVA VTKFTEGKWW YPTVYRGEDG DKRGTYVNVC TPVEVFPNEI RYVDLHVDVV KHTDGTVERV DDDELDAAVA AGDVPEALAE KARKVASAVE NAL
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