| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_0324 |
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| Symbol | |
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| ID | 8382588 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhabdus utahensis DSM 12940 |
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| Kingdom | Archaea |
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| Replicon accession | NC_013158 |
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| Strand | - |
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| Start bp | 312727 |
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| End bp | 314118 |
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| Gene Length | 1392 bp |
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| Protein Length | 463 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644971383 |
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| Product | RNA-binding protein AU-1 |
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| Protein accession | YP_003129244 |
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| Protein GI | 257051411 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1530] Ribonucleases G and E |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.623805 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGATG GTGAGTCGAT CGGCGTGCAG GTTCGGGGTA TCTACGCCAC AGCGATAACG
CAGCGGCTGG TTCGGGCGGA CGACGTCGAT GTCGTCCAGG CCTCGACACC GATCCAACGA
CGTTTCGAGA CCACGTTCGC CGAGGAACCA GCCAGCGTGA CGATCGAAAC TGACGAGCAA
CGACTGGGTG TTTCGATCGT CGGAACGCAA GCCGGTGTCG AACGGGTGCG TGATGCCCTC
GACGTGGCTA TCGACACGCT GTGCTGGAGG GATCCGACGC CGCAGGGGGC GATCTTCGAC
GGCGTCGTCA CCGAGACACT GGGGAGCGGC GCTGTGGTCG ATCTGGGTGA TACCGAGGGC
TTTCTCCCCT TCAACGCGAC CAGCGCACAC GTCGAAACCG ACGACAGACT CCGTGTCCAG
GTCGCCGAAC CCGCGGCCCC CTGGAGCACG GACCGGCCGG AACTCGACAC AACCGTGTCG
GTCCGCGGTG ATCTGGCCAC GCTCGTCCGG GAAGCGTCGA CCGAAGCCGC GGGGCCGGAC
CTCCTTGACG TGCTCTCGGT GGACGTCCCC GACGGCTGGC GGGTCTCATG GGGGCGGGAC
GCCGACGACG CCGACTTCGC GGTCCTGGAG GCCGAACTCG AACCGCTGAT CGACCGGGCC
GCCGACATCG ACGACGCATT CTCAGCCCAC GACGAGACCA CGACAACCGG TCGGATCGTC
GACGGTCGCG GAACGCAGTG GGTGCTCTTT GGCCGTGAAT CCCGCTTCGC TCTCGACGAG
GATCGCCGGG AAGTGACGCC GACGATGCCG GGCCACCACC GGATCAAGGC GGGCGACGAA
CGCGCGAGCG CCGCCGTCGA CTTCGTCGAG GACCTCGCGC CGGACCTCGA CGGTGAGTTC
CCGTTCGACG TCGTGACGCG GCAGTTCGGG CCACAGGCGG GAGACCGGGT CGCCATCGCC
CACGGCAAGC CCGACGGGCG GACGGTCAGC CTCGGCCGCG GCGACGTGAC CGAACGCGAC
CCGGACGGCA CCATCCGCGT CGAGCGCGAG ATGTCACCCG GCGGGACCTA CGACGCGCTG
GGCACAAAGC GCCGGGGTGG CGACGTCGCC GTCACGAAGT TCACCGAGGG CAAGTGGTGG
TATCCGACCG TCTACCGGGG CGAGGACGGC GACAAGCGCG GGACCTACGT CAACGTCTGT
ACGCCCGTGG AGGTGTTCCC GAACGAAATC CGGTACGTCG ATCTCCACGT CGACGTGGTC
AAGCACACTG ACGGGACGGT CGAGCGGGTC GACGACGACG AACTCGACGC GGCGGTCGCG
GCCGGCGACG TTCCCGAGGC ACTCGCCGAG AAAGCCCGCA AAGTGGCGAG CGCCGTCGAG
AACGCGCTGT GA
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| Protein sequence | MTDGESIGVQ VRGIYATAIT QRLVRADDVD VVQASTPIQR RFETTFAEEP ASVTIETDEQ
RLGVSIVGTQ AGVERVRDAL DVAIDTLCWR DPTPQGAIFD GVVTETLGSG AVVDLGDTEG
FLPFNATSAH VETDDRLRVQ VAEPAAPWST DRPELDTTVS VRGDLATLVR EASTEAAGPD
LLDVLSVDVP DGWRVSWGRD ADDADFAVLE AELEPLIDRA ADIDDAFSAH DETTTTGRIV
DGRGTQWVLF GRESRFALDE DRREVTPTMP GHHRIKAGDE RASAAVDFVE DLAPDLDGEF
PFDVVTRQFG PQAGDRVAIA HGKPDGRTVS LGRGDVTERD PDGTIRVERE MSPGGTYDAL
GTKRRGGDVA VTKFTEGKWW YPTVYRGEDG DKRGTYVNVC TPVEVFPNEI RYVDLHVDVV
KHTDGTVERV DDDELDAAVA AGDVPEALAE KARKVASAVE NAL
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