| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_0297 |
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| Symbol | |
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| ID | 8382561 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhabdus utahensis DSM 12940 |
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| Kingdom | Archaea |
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| Replicon accession | NC_013158 |
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| Strand | + |
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| Start bp | 279886 |
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| End bp | 281370 |
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| Gene Length | 1485 bp |
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| Protein Length | 494 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644971356 |
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| Product | NADH dehydrogenase (quinone) |
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| Protein accession | YP_003129217 |
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| Protein GI | 257051384 |
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| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1009] NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00538088 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTGGAC GCACAGCGAA CGCGACGGTC GGATCGCTCC CGGACACGGC GGCTACGAAG
TCGCTTGTGC CCGCAGCACT GACGTGGCTC GTGTGGGCCC TGTTCGCCGC GAGCGTGGCG
ACGCTCGTGG CCCAAGTCCG AGCGAATGAC GTATGGCGCG TGGCCAACGT GGTCGCGATC
GACGGCCTGA CTGTCCTGCT GTGGGTCGTC GTGACGTTCG TCAGCGGAAT CGTCCACAGC
TACTCGCGCC GGTACCTGTC GGGGAGCGCT CACGAACGGC GGTTTTTCGT CGCCGTCTTC
GGTTTCACAG CGGTCGTGAT GGGGCTGGTC GGGGCCGATC ACGTCGTGGT CTTTGGCTTC
CTGTGGCTGG TGATGGGTCT GGTGATGGCG GAACTCGTGG GACTCGTTAC GGGCTGGAAG
CAAGCCCGGG CGGCCGCGCG CGTCGCCCGC CGGTACTTCC TCGCGAGCGG CGCGCTGCTC
GGTCTGGCGC TCGGAGCGTT GTGGTGGGCG ACCGGCGAGC CGACGATCAC GGGGATCACC
ACGGCCACAG ACGGCCTCGG CGGGCCGGTG TGGCTGGTAG CCGTCGGCGC GCTGGTCCTC
GCGGCGATGA TCCAGTCGGC GCTGATCCCC TTCCACACTT GGTTGCTCGC CTCGATGACC
GCGCCCACGC CGGCCTCGGC GCTGATGCAC GCCGGGTTCG TCAACGCGGG CGGGATCTTG
CTGACTCGCT TTGCCCCAGT GGTTGCCATC GACCAGACGG TCATGTTCGC GATCGTCCTC
GCGGGCGCTG CCAGCGCACT CCTCGGAAAA CTCCTCAAAT CCGTCCGGAC TGACGTCAAG
GGCACCCTGG CCTGCTCGAC GGTCGGCCAG ATGGGCTTCA TGATCATGCA GGCCGGCCTG
GGTTTCTTTG GGGCCGCGAT CACCCATTTG ATCCTTCACG GGTTCTACAA AGCCCACCAC
TTCCTGAGCG CCGGCGAGGC AATCGAGCGC ACCACGCCCG GCGAGGAATC CACGGACGGA
CTGGGGCTCG TCGGCATCGC CGTCACGCTC CTCACGGGGC TGGCCGGTGG CGCGCTGTTC
GCGGTCCTGA CGGGGAAAGG TCTCCACGTC GACGGCGGCC TCGTGCTCGT GCTGATCGTG
GTCGTGACGA CGCTACAGGC GACCCGGGAG GTCGTCGCGC GCACGTCGCT GCCGGCTCTG
TTCCGGTACG GGGCGATCCC GACTGTGTTC CTGCCGGCCA TCGCCGTATA CGCACTCGTG
TATTCGGCCG TTTCGGAGCT GATGGACGGC CTTCCGGTCG TGACGGCACC GACGGAACTC
ACCGTCGTCC ACGTCGTCGT CGCCGCCGGG TTCGTCGGCG CGTACCTCGC CGTGGAGACC
GGCGTCTACG AGCGAAGCCG GCGACTCTAC GTGGCGTTGC TGAACGCGAG TCATCCGTCC
GCGCGTACCG TGCTGACTGC CAGGGAGGAC TACAATGAGT ACTGA
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| Protein sequence | MSGRTANATV GSLPDTAATK SLVPAALTWL VWALFAASVA TLVAQVRAND VWRVANVVAI
DGLTVLLWVV VTFVSGIVHS YSRRYLSGSA HERRFFVAVF GFTAVVMGLV GADHVVVFGF
LWLVMGLVMA ELVGLVTGWK QARAAARVAR RYFLASGALL GLALGALWWA TGEPTITGIT
TATDGLGGPV WLVAVGALVL AAMIQSALIP FHTWLLASMT APTPASALMH AGFVNAGGIL
LTRFAPVVAI DQTVMFAIVL AGAASALLGK LLKSVRTDVK GTLACSTVGQ MGFMIMQAGL
GFFGAAITHL ILHGFYKAHH FLSAGEAIER TTPGEESTDG LGLVGIAVTL LTGLAGGALF
AVLTGKGLHV DGGLVLVLIV VVTTLQATRE VVARTSLPAL FRYGAIPTVF LPAIAVYALV
YSAVSELMDG LPVVTAPTEL TVVHVVVAAG FVGAYLAVET GVYERSRRLY VALLNASHPS
ARTVLTARED YNEY
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