| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_0273 |
|---|
| Symbol | |
|---|
| ID | 8382537 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorhabdus utahensis DSM 12940 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013158 |
|---|
| Strand | - |
|---|
| Start bp | 262966 |
|---|
| End bp | 263724 |
|---|
| Gene Length | 759 bp |
|---|
| Protein Length | 252 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 644971333 |
|---|
| Product | Prephenate dehydrogenase |
|---|
| Protein accession | YP_003129194 |
|---|
| Protein GI | 257051361 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0287] Prephenate dehydrogenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.974204 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACGTAC TCGTCGTCGG GGCCGGGGAA ATGGGTCGGT GGGTTGCCCG GACACTGGTG
GCAGACACCA CTCATTCACC GGATATTGCC GTCACCGATC TCGATTCGAC TGCGGCCCAA
CGGGCGGCCG ACGCTGTCGG CGGCCGGGCC GTCGCTTCGG AGACGACAGA GCGCTTCGAG
CTGGTCTGCA TCGCCGTCCC GATGCCGGTG ACCGCCGAAG CGATCGAGAG TTACGCCACG
AACGCTGAAG AGGCCATCTG TGATCTTGCA GGGATCATGG CCGAACCCGT CGAGGCGATG
GCCGAACATG CCCCTGATTG CGAGCGGGTG AGTTTTCACC CGCTGTTCGC TCCGGCGAAC
GCTCCCGGGA ACGTGCCGCT TGTTGCTGCT GAATCAGGCC CCGTCACGGA TCGGGTTCGT
AACGCGCTCA CTGCCGCCGG CAACGAGCTA TTCGAGACGA CGCCGGCGGA ACACGATGCG
GCGATGGAGA CCGTTCAGGC CCGGACCCAC GCCGCGATCC TGGCGTTCGG GCTGGCTGCC
GAGCCCGTGC CGGATCGATT CCAGACCCCC ATCTCCGCGG GGTTGTTTGA CTTACTTGAG
ACCGTCACTG ACGGCGAACC CCGCGTCTAT GCCGACATCC AGGCGGCGTT CGAAGGTGTC
GACGACGTCG CCGCCGCGGC TGACCGACTC GCGAATGCCG ACGACGATGG GTTCGAGGAA
TTGTATCAGG CCGCTCGCCC GGCCCAGGGG ACCCGATGA
|
|---|
| Protein sequence | MNVLVVGAGE MGRWVARTLV ADTTHSPDIA VTDLDSTAAQ RAADAVGGRA VASETTERFE
LVCIAVPMPV TAEAIESYAT NAEEAICDLA GIMAEPVEAM AEHAPDCERV SFHPLFAPAN
APGNVPLVAA ESGPVTDRVR NALTAAGNEL FETTPAEHDA AMETVQARTH AAILAFGLAA
EPVPDRFQTP ISAGLFDLLE TVTDGEPRVY ADIQAAFEGV DDVAAAADRL ANADDDGFEE
LYQAARPAQG TR
|
|---|
| |