Gene Huta_0190 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHuta_0190 
Symbol 
ID8382452 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhabdus utahensis DSM 12940 
KingdomArchaea 
Replicon accessionNC_013158 
Strand- 
Start bp187754 
End bp188290 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content66% 
IMG OID644971248 
ProductHAD-superfamily hydrolase, subfamily IA, variant 3 
Protein accessionYP_003129111 
Protein GI257051278 
COG category[R] General function prediction only 
COG ID[COG0546] Predicted phosphatases 
TIGRFAM ID[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.615275 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAGTGT CGTACGAGGC GGTGATATAT GACCTCGACG GGACTCTCGT CCGGCTCGAT 
GTCGACTGGA CGCTGGTGAC CCAGAAGGTC GCGTCCCGTC TCAGAGATCG GGGGATCGAC 
ACCGAGGGGG CAAGTCTCTG GGAGTTACTC GAACGCGCCG AAGCCGCGGG GATCTTGGAC 
GTGGCAACTG AAGTCGTGGC GACGCACGAA CGCGTGGGCG CTCGCACAGC AGAGCGATTG 
CCTGCAGCGG CCGAACTCCC ACTCGACGTG CCGGTCGGCG TCTGCTCGCT GAACGCTGAG 
GCGGCGGTTC GAACGGCCCT GGAGCGCCAC GACCTGCTCG AAGCCGTCGA GGCGGTCGTG 
GGTCGGGACA CGCTCTCAGC CCAGAAACCG GATCCCGAAC CCCTGCTCGC ACTGGCCGAC 
CGACTCGACG CCGACCCTGC GCGGACACTG TTCGTCGGCG ACACGGCGAA AGACGAACGA 
ACGGCTGATC GGGCCGGGAT GGACTTCCAG TACGTCGAGG AGTGGCTCGA AAAGTGA
 
Protein sequence
MTVSYEAVIY DLDGTLVRLD VDWTLVTQKV ASRLRDRGID TEGASLWELL ERAEAAGILD 
VATEVVATHE RVGARTAERL PAAAELPLDV PVGVCSLNAE AAVRTALERH DLLEAVEAVV 
GRDTLSAQKP DPEPLLALAD RLDADPARTL FVGDTAKDER TADRAGMDFQ YVEEWLEK