| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_0154 |
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| Symbol | |
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| ID | 8382416 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhabdus utahensis DSM 12940 |
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| Kingdom | Archaea |
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| Replicon accession | NC_013158 |
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| Strand | + |
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| Start bp | 149669 |
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| End bp | 150730 |
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| Gene Length | 1062 bp |
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| Protein Length | 353 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 644971212 |
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| Product | integrase domain protein SAM domain protein |
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| Protein accession | YP_003129075 |
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| Protein GI | 257051242 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.32279 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTACCG GTACTGCCAT TCCAGAGGAG GTTGAAGATC CGATCGAGTA CTTCCTGACG
GATATTACCT ACCAGGGAAA GAGCCAGCGG ACGAGTGACG CTTACGAACG GGTCCTCAGG
GATTTCGAAG CATCACTCCG TGAGAACGGC GAGAAGCCCC TCGCTGTGGC CTCACATCGT
GATTGTATGG CGTGGATCCA TTCCCAGCGA GAAGAGCTCT CAAAGAGCAC TGTGGCCACG
TACGCGTCCT ATCTACACCG ATTTTACGCC TATATGACCC AGATCGGCGT CTTCGATTCG
AATCCGATGG CGATCGTCGT CGAAGAGATG GACGAACGGA TCGACGCTGA TCCGGCTCGT
CGCGACGTTT CGATCCCGGA AATGCAGGGC TTCGTCTCCG GAATCGACCA TCCGCTGGAC
CGTGCGGTAA TCGTCACGTT GCTGAAGACC GGGATGCGAG TCGGCGAGTT GTGTAATCTC
GATCAGCGTG ATCTCCATCT GTCCGATGAT CCCCGCGAAT CGGTAACGAC ACGACCCGCC
CTCGATGGGC GACCGGACTC ACTGTTCGTC GCAAGTGAGC CCTCTCGGGG TGCAACAGTG
AATGGCGAGC AGCGGGCTGC CTCGAACAAG CGCCGGCGAG ACACAGTCGT TCCTGTCGAT
GCCGACCTGG CCGAGACGCT CCGGGCCTGG CTGGATGTTC GTCCTGACCC GGTTTCGTCC
GCGCGTCCGC TGTTTACCAG TACGACGGAC AACTGGGGCC AGCGGATCAC GACTGATGGG
GTACGTCACA TCGTCACCAG CCACGCAAGT GTGCATGGGT GGTACGACAA CGGTGGCGGT
GTCGAGGAAA ACGTCACGCC ACACTACTTC CGGCACTTCT TCACCACACA CCTTCGAGAT
CGAACCGGTG ACCGTGGGAT CGTGAAGTAT CTGCGCGGCG ACGTCGCCCA GGATATCATC
GATACGTACA CCCACGATTG GGGAGATCGG GTTCGTGACG TATACGAAGA TCACATCTAC
GAGCTTCCGG TGGCTGCATA TCGTACGATG TCAGAGACAT AA
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| Protein sequence | MSTGTAIPEE VEDPIEYFLT DITYQGKSQR TSDAYERVLR DFEASLRENG EKPLAVASHR
DCMAWIHSQR EELSKSTVAT YASYLHRFYA YMTQIGVFDS NPMAIVVEEM DERIDADPAR
RDVSIPEMQG FVSGIDHPLD RAVIVTLLKT GMRVGELCNL DQRDLHLSDD PRESVTTRPA
LDGRPDSLFV ASEPSRGATV NGEQRAASNK RRRDTVVPVD ADLAETLRAW LDVRPDPVSS
ARPLFTSTTD NWGQRITTDG VRHIVTSHAS VHGWYDNGGG VEENVTPHYF RHFFTTHLRD
RTGDRGIVKY LRGDVAQDII DTYTHDWGDR VRDVYEDHIY ELPVAAYRTM SET
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