| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_0142 |
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| Symbol | |
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| ID | 8382404 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhabdus utahensis DSM 12940 |
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| Kingdom | Archaea |
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| Replicon accession | NC_013158 |
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| Strand | + |
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| Start bp | 138983 |
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| End bp | 140302 |
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| Gene Length | 1320 bp |
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| Protein Length | 439 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644971200 |
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| Product | ribonuclease II |
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| Protein accession | YP_003129063 |
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| Protein GI | 257051230 |
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| COG category | [K] Transcription |
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| COG ID | [COG0557] Exoribonuclease R |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGCTA ACGAGGAGGA CGAGCAGGCC GCGGCGGGCA CCCCCGAGGG GCAGGGTCCC
GTCGAGATCG ACGAGGAACT CGCCCGCCAT CTCGAGAACA AACGCGAGGA ACTCTTCGAG
AAGTTCGAAA TCCCGGACGG CTTTCCGCCC GAAGTCCTCG AAGAGGCGAA AGCCCGAACC
GAGGACGTGG GAAGCGAGAT CGAGGCGGAG ATCGACGAGC GACGTGACCT TCGGGAGATG
ACGACCTGGA CGACCGACCC GATCGACGCC CAGGACTTCG ACGACGCCAT CTCGATCGAG
CATCGCGACG ACGAGATCGT CCTCTGGGTT CATATCGCCG ACGTGACTCA CTACGTGAAT
CCGGACACGG CGATGTGGAG TTCGGCCGTC GAGCGCGCGA ACACCGTCTA TCTGCCGGGC
TACACCGTCC ACATGCTACC ACCGATCCTG GCCGAGACGG TCTGCTCGCT GGTCCCCAAC
GAGGACCGAC TCGCCCACAC CGTCGAGATG CACCTCGATC CGGAGACCCT CTCATACGAG
AACATCGAGA TCTACAAGTC TGTCATCCGA AGCGATGCCC GACTGACCTA CACCGAGGCT
GAACGCCTCC TCGACGAACC CGAGACGGCC GAGGATGTTC TGGAAGACCA GTCGGTGGAC
CTCGCCGAAA AGACCCAGGC GATCTGGGAA CTCGCGGATC AGATGCACGA GCAGCGCAAG
GCGGACGGCT CACTCGTGTT GAACCCACGC CGCGATCGCG CCCATACGAT CATCGAGGAG
TGTATGCTCA AAGCCAACAA GGCCGTGACG CACGTCCTCA TGTGGGATCG GGGCGTCGAG
GCGATGTATC GCGTGCATCC ACAGCCAAGC CCGGAGGAGT GGAACGAGGC GCTCCAGGAG
ATTCAGGACT TGGGCGGCGT CTCGATCCCA GGCGGGGGCT GGGACGATCC ACGGCAGGCC
GTCAACGCGA CGCTGGAAGA TGCCCCGGAG CGCCAGCTTG ACAAGATCCA GTGGGCCGTG
ATGAAAGTGA TGCCCCGTGC GAAGTATATG AACGACCCCT TCGGCGGCCA CCACGCGCTG
AACTTCGAGA TCTACGGTCA CTTCACGTCG CCGATCCGTC GGCTCTCCGA CCTGATCAAC
CACTGGATCG TCCATACCAA CGATGTTCCC GAGGATCTCG TTGCACTGTG TGATCGCGCC
AGCGACAAAC AGAAGGACGC CGAACAGTGT GAACGGGAGT ACAAGAAGTT CCTCGAAGAA
GTCGGTCTCG ACCCCGCAGC GGTCAACAAC CGCGGCATCG AGGTTATCGA CTCCGACTAG
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| Protein sequence | MTANEEDEQA AAGTPEGQGP VEIDEELARH LENKREELFE KFEIPDGFPP EVLEEAKART
EDVGSEIEAE IDERRDLREM TTWTTDPIDA QDFDDAISIE HRDDEIVLWV HIADVTHYVN
PDTAMWSSAV ERANTVYLPG YTVHMLPPIL AETVCSLVPN EDRLAHTVEM HLDPETLSYE
NIEIYKSVIR SDARLTYTEA ERLLDEPETA EDVLEDQSVD LAEKTQAIWE LADQMHEQRK
ADGSLVLNPR RDRAHTIIEE CMLKANKAVT HVLMWDRGVE AMYRVHPQPS PEEWNEALQE
IQDLGGVSIP GGGWDDPRQA VNATLEDAPE RQLDKIQWAV MKVMPRAKYM NDPFGGHHAL
NFEIYGHFTS PIRRLSDLIN HWIVHTNDVP EDLVALCDRA SDKQKDAEQC EREYKKFLEE
VGLDPAAVNN RGIEVIDSD
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