| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_0131 |
|---|
| Symbol | |
|---|
| ID | 8382393 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorhabdus utahensis DSM 12940 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013158 |
|---|
| Strand | - |
|---|
| Start bp | 126563 |
|---|
| End bp | 127633 |
|---|
| Gene Length | 1071 bp |
|---|
| Protein Length | 356 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 644971189 |
|---|
| Product | transcriptional regulator, TrmB |
|---|
| Protein accession | YP_003129052 |
|---|
| Protein GI | 257051219 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1378] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGAAG GCGACGATTC GGCACTCGCT CGGCAGTTAG CGCACTTCGG ACTGTCGGAC
ACCGAGATCC AGACCTATCT TGCGGTCCTC GAAAACGGTG AGGCAAAGGC GAGTACGATC
GCGGACGCGA CTGGCGTCTC CAAACGGTAC GTCTACAGCG TCTGTGAAGA ACTCGAAGAC
CAGGGGTTTG TCGAGGTCAA CGATCACGTC GTCCCGACGA AGATCCGCGC CAAGCGGCCG
GAAGACGTTA TCGAGATCCT CTCGAACCGT CTCGAAGAGA TCGAGCCGGC ACTCGAACGT
CGCTTTTCAG AGGCCACATC CCGGCCCCAG CGCTTCGACG TGATCAAGTC CCGGGTCACC
GTGGTGAAAC GGATCAACGA GTACATCGAG GAATCCGAAC AGCGGATCGC GTTGTCGATC
CCCCATTCGA CGCTGCCGCG CGTGATCGAG GGGCTTCAGG ACGCCGTTGA GCGGGGCGTG
TTCGTCCTCC TGCTGGTGAC GGATGCACAG CCGGACCCAA CCGAGTTTGC GGCGTACGAT
CGCCCCGTGG CGAGTGCTGT CCGGAGTTGG AACGTTCCAG TCCCAGTGAT GCTGACCGTC
GATGGTGAGT TCGGTATCGT CTCCTCTTCG GAGATGATGA CGGTCGCAAA CAGCGACGAA
CGGGCAATAT CGCTGGTTCA GGAGCGGATC GTTCCGACAC TGTTCGAATC GTTCCTGGCG
AACTTCTGGC TGAGTGCCGA CGAACTGTCC GTGATCGAGG CGGCGCCGTT GCCCCAAACG
TACGACAGCT TCGAGCACGC GGTCTTCCAG GCAACGCTGC ATCTGCGGGA GGGGACTGCC
GTGAGTGCCT GTGTGGAGGC GACACCGAAC GAGGGTGGGG CGGACGTCGA AACCGTCACC
GGCCGCGTCG TCGAGACGAA CCAGGGAATC GTCGACCCGG TCACCAACGA GTTCCCGATC
GAGCACACGC TGGTGCTTGA GACCGACGAG GGCCGGACGA CCGTTGGCGG CCACGGTGCG
TTCCTCGAGG AATACGCCGC CAGAACGGTC AAACTCGAAG CTGCTGACTG A
|
|---|
| Protein sequence | MSEGDDSALA RQLAHFGLSD TEIQTYLAVL ENGEAKASTI ADATGVSKRY VYSVCEELED
QGFVEVNDHV VPTKIRAKRP EDVIEILSNR LEEIEPALER RFSEATSRPQ RFDVIKSRVT
VVKRINEYIE ESEQRIALSI PHSTLPRVIE GLQDAVERGV FVLLLVTDAQ PDPTEFAAYD
RPVASAVRSW NVPVPVMLTV DGEFGIVSSS EMMTVANSDE RAISLVQERI VPTLFESFLA
NFWLSADELS VIEAAPLPQT YDSFEHAVFQ ATLHLREGTA VSACVEATPN EGGADVETVT
GRVVETNQGI VDPVTNEFPI EHTLVLETDE GRTTVGGHGA FLEEYAARTV KLEAAD
|
|---|
| |