Gene Cpin_7300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_7300 
Symbol 
ID8363494 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp9124819 
End bp9126381 
Gene Length1563 bp 
Protein Length520 aa 
Translation table11 
GC content50% 
IMG OID644969433 
ProductFAD dependent oxidoreductase 
Protein accessionYP_003126900 
Protein GI256426247 
COG category[R] General function prediction only 
COG ID[COG2509] Uncharacterized FAD-dependent dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones56 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATACAAC AACTCTCGCT CAAATTGCTG CCATCTCAGG CAGCTTCTGA TACCAGCATT 
ATCGCTGAAG CAGCAGCCGC CCTCGGTGTT AAGCCCACTG CCATCACAGG CTTTCATCTG
CTCAAACGCT CTATAGACGC ACGTTCCCGC CAGGCTTACT TCATGCTCAC CGTTAAGGTG
TTTGTCGATG AACCTTTCCA GGAAAGAGAA CGTATCATAC CGATATATGA TAGCTTGCCC
TCAAACGCGC CACAGGCCAT CGTTATAGGG GCCGGGCCGG CAGGTCTATT CGCCGCTTTG
CGTCTTGTAG AAGCAGGTAT CAGACCCATT GTACTTGAGC GGGGTAAGGA TGTACGTGCA
AGAAGAAGAG ACCTTGCTGC GCTTAATAAG ACGGGTGTTG TTAATCCGGA GTCTAACTAT
TGTTTTGGCG AAGGTGGCGC CGGTACCTAC TCTGACGGTA AGTTATATAC CCGCTCCAAT
AAGCGTGGCG ACATCAACCG CATCCTCAGC ATCTTTGTAC ACTTCGGCGC TACAGAAAAG
ATCATGTATG AAGCGCATCC ACATATAGGA ACCAATAAGT TACCTCATAT CATAGTGGCT
ATGCGTGAGC AGATTGTCAA CAGCGGCGGA CAGGTATTAT TTGAACAGAA GGTGACTGAT
ATATTGACAG CCAATAATCA GGTAACAGGG GTGAGGACTG CCAGCGGACA AACATTCGAA
GCTGCCAGGA TCATCCTTGC CACAGGCCAC TCTGCCCGTG ACATCTTCCA CCTGCTGCAT
CAGAAGAACA TACTGATCTC TGCAAAGCCT TTTGCTTTGG GCGTACGCGT GGAACATCCA
CAGGCATTGA TCGACAGTGC ACAATATCAT TGTCCTACCA GGAATGAGTA TCTCCCGCCT
GCCAGCTATA GTCTTGTAGA ACAGGTAGAA GGACGTGGTG TTTTTTCTTT CTGTATGTGT
CCTGGTGGTA TCATTGCGCC CGCTTCGACT GATCCGGGAG AACTGGTCGT TAACGGATGG
TCGCCATCCA GACGTGATAA CCCCTACGCT AACTCCGGTA TGGTGGTGAC GATAGATGAA
ACTGATTTCC AGATCTTTGC TGATAAAGGT CCGTTAGCAG CTATGTACTA TCAGCAGATG
GTAGAGCGTA CAGCCTTTAC TGCTGGCGGC GGACAATTTG TAGCGCCCGC TCAACGAATG
ACGGATTTTG TCCACAGTAA GGTTTCCACA ACTTTACCTT CCTGCTCTTA TTTACCTGGT
GTAAACAGCA CCAATCTCCG TGATGTCCTT CCTGTTAGTG TGCATACCCG GCTGGCAGAA
GCCTTCAAAG CTTTTGGCCG TAAGATGAAA GGATATTATA CAGCAGATGC TATACTGGTA
GCTACTGAAT CCCGCACATC CTCTCCTGTA CGTATTCCAC GTGAAGACGA AACACTGATG
CATCCGCAGA TCAACGGCCT TTATCCTTGC GGAGAAGGCG CCGGTTACGC AGGCGGTATC
GTGTCGGCGG CAATGGACGG AGAACGTGTA GCAGAGCGTA TTATAGCTTT CTATCACAGG
TAA
 
Protein sequence
MIQQLSLKLL PSQAASDTSI IAEAAAALGV KPTAITGFHL LKRSIDARSR QAYFMLTVKV 
FVDEPFQERE RIIPIYDSLP SNAPQAIVIG AGPAGLFAAL RLVEAGIRPI VLERGKDVRA
RRRDLAALNK TGVVNPESNY CFGEGGAGTY SDGKLYTRSN KRGDINRILS IFVHFGATEK
IMYEAHPHIG TNKLPHIIVA MREQIVNSGG QVLFEQKVTD ILTANNQVTG VRTASGQTFE
AARIILATGH SARDIFHLLH QKNILISAKP FALGVRVEHP QALIDSAQYH CPTRNEYLPP
ASYSLVEQVE GRGVFSFCMC PGGIIAPAST DPGELVVNGW SPSRRDNPYA NSGMVVTIDE
TDFQIFADKG PLAAMYYQQM VERTAFTAGG GQFVAPAQRM TDFVHSKVST TLPSCSYLPG
VNSTNLRDVL PVSVHTRLAE AFKAFGRKMK GYYTADAILV ATESRTSSPV RIPREDETLM
HPQINGLYPC GEGAGYAGGI VSAAMDGERV AERIIAFYHR