| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_7291 |
|---|
| Symbol | |
|---|
| ID | 8363485 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | - |
|---|
| Start bp | 9114193 |
|---|
| End bp | 9115026 |
|---|
| Gene Length | 834 bp |
|---|
| Protein Length | 277 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 644969424 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_003126891 |
|---|
| Protein GI | 256426238 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 52 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATATCCA TCCAGAATCT ATCATTCAGT TATCGAAAGA ACAAGCCTTT GTTCGAGCAC
CTGAATCTGC AGCTGGAGGC TGGTCACATT TATGGTTTGC TGGGAAAGAA TGGTGCGGGT
AAGTCCAGTC TGCTGAAGCA TATTGCAGGG TTGTTATTCC CTAATGCCGG TCACTGTAAG
GTGCTGGGTT TTGAATCACG TTATCGTCAA CCGGCGTTTT TGCAGAACAT CTTTATGGTA
CCGGAAGAGT TCTATCTGCC ACAGGTGAGT ATCAAGAGTT ACGTAAGTAC CTATGCCCCT
TTCTACCCCT TGTTTGATAA GAAGGCATTC TACAACTATC TGGAAGAGTT CCAGATCCCC
ATGGACCAGA AACTGACAGA AATGTCTTAT GGTCAGAAAA AGAAAGTGCT GATCAGTTTT
GCACTGGCCT CCAACACAAA AGCGTTGATC CTTGACGAGC CGACCAATGG TCTGGATATT
CCTTCCAAGA GCCAGTTCCG TAAAGTGATT GCGGCGGCTG TCAGCGATGA AAAATGCATC
ATCATCTCTA CACACCAGGT ACGTGATCTG GATAACCTGA TCGATAGTAT TGTGATCATC
GACAATCACA AGATCATCTT CAGACAGGAC GTGGAAACAG TAACCGACAG ACTGCTATTC
AGTACGGTAA CCAACATTGC GGATACGAAT AAAGTACTGT TTTCAGACAG TTCTATCCGT
GGTCATGCTG TTATCATGCA GAATGAAGGA GCGCAGCATA GCAAGATTGA CATGGAACTG
CTGTTCAATG CTGTATTGGA TAAACCTGAG CGCATCACAC AAATCTTTAA CTAA
|
|---|
| Protein sequence | MISIQNLSFS YRKNKPLFEH LNLQLEAGHI YGLLGKNGAG KSSLLKHIAG LLFPNAGHCK
VLGFESRYRQ PAFLQNIFMV PEEFYLPQVS IKSYVSTYAP FYPLFDKKAF YNYLEEFQIP
MDQKLTEMSY GQKKKVLISF ALASNTKALI LDEPTNGLDI PSKSQFRKVI AAAVSDEKCI
IISTHQVRDL DNLIDSIVII DNHKIIFRQD VETVTDRLLF STVTNIADTN KVLFSDSSIR
GHAVIMQNEG AQHSKIDMEL LFNAVLDKPE RITQIFN
|
|---|
| |