Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_7272 |
Symbol | prfH |
ID | 8363466 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 9090709 |
End bp | 9091341 |
Gene Length | 633 bp |
Protein Length | 210 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 644969405 |
Product | peptide chain release factor-like protein |
Protein accession | YP_003126872 |
Protein GI | 256426219 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1186] Protein chain release factor B |
TIGRFAM ID | [TIGR03072] putative peptide chain release factor H |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000000014386 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.97905 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACAAGT CAATTATACA GGTAACGGCC GGAAGAGGGC CGGAGGAATG TAGCAGAGTC GTGGCAAGGG TGGTAGAAAT GATGATGAAG GATGCCCGTG GAAAAGCATT GGATATCACT TTACTGGAGA GCACAAAAGG ACATCTGAAA GGAACTTTAT TGTCGGCGGT ATTACTGATT CAGACAGGCG GTATTTCAAG CAACAAGACC CTTGAAGCGT TTATACAGGA ATGGCGGGGT ACGATACAGT GGGTAGCGCA GAGTCCTTTC AGAAAATACC ATAAACGAAA GAACTGGTTT GTGGGTGTGG AGGTCTTTGA TGTGAATAAA CAGCAGGAAT GGAATCTGAA GGACGTGAAA CTGGAATCAT GCCGGGCGTC CGGACCTGGC GGTCAACATG TTAATAAGGT GGAGACGGCA GTACGCGGTA CGCATCTGCC ATCGGGTATG CAGGTACTGG CGATGGACAG CCGTTCACAG TTAGAGAACA AGCAGCTTTG TCTGAAAAGA CTGGAAGCGA AGTTCATGGC CTGGCAGATG GAACAACTGC TGGCAAAACA GCAGGATCAG TGGCAGGAGC ATAATGAGCT GGAAAGAGGA CGGGCGGTGA AAGTCATTAC AGATAAATTA TGA
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Protein sequence | MNKSIIQVTA GRGPEECSRV VARVVEMMMK DARGKALDIT LLESTKGHLK GTLLSAVLLI QTGGISSNKT LEAFIQEWRG TIQWVAQSPF RKYHKRKNWF VGVEVFDVNK QQEWNLKDVK LESCRASGPG GQHVNKVETA VRGTHLPSGM QVLAMDSRSQ LENKQLCLKR LEAKFMAWQM EQLLAKQQDQ WQEHNELERG RAVKVITDKL
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