Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_7258 |
Symbol | |
ID | 8363452 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 9073605 |
End bp | 9074396 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 644969392 |
Product | protein of unknown function DUF81 |
Protein accession | YP_003126859 |
Protein GI | 256426206 |
COG category | [R] General function prediction only |
COG ID | [COG0730] Predicted permeases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.338595 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCACAT TATTACAACA GACCGATTAT CTGGTCGTAT TAATCATTGG CCTTATCGTA GGCTACCTGT CCGGTTTATT GGGCAAAGGT GGCAGCGCAG TAAGTACGCC GGCCTTGCAG ATATTTGCAG GCGTCAATCC GTTTTATGCG CTGGCATCAC CATTGCCGGC AGCGATCACC AGTACAATAT CAGCTACAAC TGTTTACAGC CGTCAAAAGT TATTCAACCG CAAAGTGATT CTGACCGGCG CTTTATTTGG TGTGCCTGCA ACGCTGGCAG GTTCTTTTCT GAGCAAGTTT CTGCCGGGTA AGACATTGAT GATACTGACA GCTTTGTTCA TCGTATCTAT TGGTGGTTCA CTGTTATTTT CATTTCTGAG AAAGAAGAAC GTGGAAGAAA CACCTGTTGT TGAAAATGCC GCAGAAGGGC ATCAGCAACT GATTGTCCTG GCTTCACTGG GTATTGGATT GTTATCCGGT TTGCTGGCGA ATGCAGGCGG GGTATTATTC AGTTCCTTCT TTATCAAGAA ACTTCATATG CCGATCAAAC AGGCCCTGGC CTGTTCCATT GTATTATCTG CATTGCTGTC TATACCAGGT GCACTGGCGC ACTGGTGGCT GGGACATATC GACTGGAATA TTGCTTTGGT ATTATCACTG ACGGCTATTC CATCTTCTTA TCTGGGCGCT AAGACAGCGG TAAAGATGAA GTCACCCTTA CTGGAAAAGT TATTTGCATG TACACTGATC GTCTTCGGTG TGTATGATAT CATCTATACC TTGTGCAAGT AA
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Protein sequence | MFTLLQQTDY LVVLIIGLIV GYLSGLLGKG GSAVSTPALQ IFAGVNPFYA LASPLPAAIT STISATTVYS RQKLFNRKVI LTGALFGVPA TLAGSFLSKF LPGKTLMILT ALFIVSIGGS LLFSFLRKKN VEETPVVENA AEGHQQLIVL ASLGIGLLSG LLANAGGVLF SSFFIKKLHM PIKQALACSI VLSALLSIPG ALAHWWLGHI DWNIALVLSL TAIPSSYLGA KTAVKMKSPL LEKLFACTLI VFGVYDIIYT LCK
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