Gene Cpin_7258 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_7258 
Symbol 
ID8363452 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp9073605 
End bp9074396 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content45% 
IMG OID644969392 
Productprotein of unknown function DUF81 
Protein accessionYP_003126859 
Protein GI256426206 
COG category[R] General function prediction only 
COG ID[COG0730] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.338595 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCACAT TATTACAACA GACCGATTAT CTGGTCGTAT TAATCATTGG CCTTATCGTA 
GGCTACCTGT CCGGTTTATT GGGCAAAGGT GGCAGCGCAG TAAGTACGCC GGCCTTGCAG
ATATTTGCAG GCGTCAATCC GTTTTATGCG CTGGCATCAC CATTGCCGGC AGCGATCACC
AGTACAATAT CAGCTACAAC TGTTTACAGC CGTCAAAAGT TATTCAACCG CAAAGTGATT
CTGACCGGCG CTTTATTTGG TGTGCCTGCA ACGCTGGCAG GTTCTTTTCT GAGCAAGTTT
CTGCCGGGTA AGACATTGAT GATACTGACA GCTTTGTTCA TCGTATCTAT TGGTGGTTCA
CTGTTATTTT CATTTCTGAG AAAGAAGAAC GTGGAAGAAA CACCTGTTGT TGAAAATGCC
GCAGAAGGGC ATCAGCAACT GATTGTCCTG GCTTCACTGG GTATTGGATT GTTATCCGGT
TTGCTGGCGA ATGCAGGCGG GGTATTATTC AGTTCCTTCT TTATCAAGAA ACTTCATATG
CCGATCAAAC AGGCCCTGGC CTGTTCCATT GTATTATCTG CATTGCTGTC TATACCAGGT
GCACTGGCGC ACTGGTGGCT GGGACATATC GACTGGAATA TTGCTTTGGT ATTATCACTG
ACGGCTATTC CATCTTCTTA TCTGGGCGCT AAGACAGCGG TAAAGATGAA GTCACCCTTA
CTGGAAAAGT TATTTGCATG TACACTGATC GTCTTCGGTG TGTATGATAT CATCTATACC
TTGTGCAAGT AA
 
Protein sequence
MFTLLQQTDY LVVLIIGLIV GYLSGLLGKG GSAVSTPALQ IFAGVNPFYA LASPLPAAIT 
STISATTVYS RQKLFNRKVI LTGALFGVPA TLAGSFLSKF LPGKTLMILT ALFIVSIGGS
LLFSFLRKKN VEETPVVENA AEGHQQLIVL ASLGIGLLSG LLANAGGVLF SSFFIKKLHM
PIKQALACSI VLSALLSIPG ALAHWWLGHI DWNIALVLSL TAIPSSYLGA KTAVKMKSPL
LEKLFACTLI VFGVYDIIYT LCK