| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_7254 |
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| Symbol | |
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| ID | 8363448 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 9066654 |
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| End bp | 9067976 |
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| Gene Length | 1323 bp |
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| Protein Length | 440 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644969388 |
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| Product | protein of unknown function DUF1080 |
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| Protein accession | YP_003126855 |
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| Protein GI | 256426202 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000293635 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.71245 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCCAGA AGAAGGCAGA ATGGCATAAT CTCTTCAATG GCAAGAATCT GGATGGCTGG
AAAGAAGTAA ACGGCACTGC CATCTATGAT GCAAAAGATG GGATGATCAC CGGAACATCA
GTAGCCGGCA GCCCCAACTC CTTCCTCGCA ACTGAAAAAG ACTACGGTGA CTTTATCCTC
GAACTGGAAC TGAAGCTGGA TGCTGCTATG AACTACGGCA TACAATTCCG CAGCGAGAGC
AAACCTGACT ACAACAATGG CCGTGTACAT GGTTATCAGA TGGAGGTGGA TCCGAGCGAT
CGTGCATGGA GCGGTGGTAT CTATGACGAA GCCCGCCGTG GCTGGTTATA TCCGCTGGAA
CTGAATCCGG CAGCGAAACC CGCATTCAAA AAAGAAGGCT GGAACAAATA CCGTATAGAA
TGCCGTGGCG CGGAAATCCG TACCTGGGTG AACGGTGTTC CCTGTGCTCA CCTGATCGAC
GAGATGACAC TGAAAGGTTT CATCGCATTA CAGGTGCACC AGATTTATAA AGAAGACGAT
AAGGGTAAAC AGATTCACTG GCGCAATATC CGCATCATGG AGAATCCGGC CCCTTCTCAA
TACTCTCCTT ATGACAAGAT CTTTGTTGTA AATAATCAGC CAAACAACGT TTCCCCGCAG
GAAAAGAAAA ATGGCTTTAC ACTGCTCTGG GATGGTAAAA CCTCCGAAGG ATGGCGCAGG
GTGAATCAGG ATAAGTTTCC GACTACCGGC TGGTCAATGG ACAACGGCGA ACTCACCATC
CATCAGTCCA ATGGCGATGA AATGGGCTCC GGCGGAGATA TCGTAACCAA AAAAGAGTAC
GGTGCATTCG AACTGGAGTT TGACTTTAAA CTCAGTGAAG GCGCTAACAG CGGGGTTAAA
TACTTTGTAA AAGAAGACTA CGATACAAAA GGTAAATCTG CGATTGGTCT TGAGTACCAG
GTACTTGATG ACGAACGTCA CCCGGATGCC AAGCTAGGCC GCGATGGGAA CAGGACTTTA
TCCTCCCTGT ACGACCTCAT GACACGTACA AATACGGATT TAAATAAAGC AGCTATAAAG
AAGATTGGAG AATGGAATAA AGGGCGTATA ATTGTATTTC CCAACAACCA TGTTGAACAT
TGGTTGAATG GCTTCAAAAT GCTGGAGTAC GAAAGGGGTT CCAAAGAATT TAAAGACCTG
GTAGCGATCA GTAAGTACAA AAATTGGAAT AACTTTGGAC TATGGCCTGA GGGACACATC
TTATTGCAGG ACCACGGCAA TACAGTGTCA TTCCGTAGCA TAAAAATCAA AAATTTAAGA
TAG
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| Protein sequence | MAQKKAEWHN LFNGKNLDGW KEVNGTAIYD AKDGMITGTS VAGSPNSFLA TEKDYGDFIL
ELELKLDAAM NYGIQFRSES KPDYNNGRVH GYQMEVDPSD RAWSGGIYDE ARRGWLYPLE
LNPAAKPAFK KEGWNKYRIE CRGAEIRTWV NGVPCAHLID EMTLKGFIAL QVHQIYKEDD
KGKQIHWRNI RIMENPAPSQ YSPYDKIFVV NNQPNNVSPQ EKKNGFTLLW DGKTSEGWRR
VNQDKFPTTG WSMDNGELTI HQSNGDEMGS GGDIVTKKEY GAFELEFDFK LSEGANSGVK
YFVKEDYDTK GKSAIGLEYQ VLDDERHPDA KLGRDGNRTL SSLYDLMTRT NTDLNKAAIK
KIGEWNKGRI IVFPNNHVEH WLNGFKMLEY ERGSKEFKDL VAISKYKNWN NFGLWPEGHI
LLQDHGNTVS FRSIKIKNLR
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