Gene Cpin_7250 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_7250 
Symbol 
ID8363444 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp9059932 
End bp9060855 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content48% 
IMG OID644969384 
ProductKWG repeat protein 
Protein accessionYP_003126851 
Protein GI256426198 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0105144 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.780097 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAGT ATCCCATCCT CCTGTGCCTG CTGTTTCCTG CCTTAATGGG CTATTCTCAG 
ACACTGACCT CCGCCGCTAA AGCCGGAGGA GATACCCTTT CACTTGTAAA AATCGAAAAA
GCCGGTAAGT ATGGCTTCAC TGATACGTCA GGGAAGGTAG TTATTGCGCC GGTATATGAC
GCGATCGGAC CATTTCAACA TGGGCTGGCC GTGGTGCAGA AGGGTAAAAA GACAGGTTAT
TTATTGCCGA ACGGAAAGAC GTCTTCGCTC AAATATGACT CTGCCTGGGT AAAAGAAGGC
CGGTATCATT TTGTAAAGCT GGATGGCAAG GTGGGGCTGC TGGATGACCA GGGTAAGGAG
CTGGTAGCGC CGAAGTATGA GGAAGTGAAT GGCATCCGGG ACGGTTATGT GTCGGTGAAG
CAGGGGGGTA AGTATGGTGT GATCAATCCG CAGGGTAAAA TGGTATTAAA GCCTGTATAC
GAGCGACTTG GTTTTGTAAC CAATGGGACC ATGCTGGTGT ATATTGATGG TAAATGCGGC
CGGGCTGACC TGCTGAAGGG GAAGGTGGTG ATGACGTCTT ATGAAAAGGT GGGACCTTTC
CGGGATGGTA TGGCCTGGGT AAGACAGGAT AAGAAATTTG GTTTTATTAA TGCAGACGGC
GACCTGGTGA TCCCGGTGAT GTATGACTGG GTGGGCAACT TCAATGAGGG ACTGGTAGCT
GTGGCGACCG AAAAGAAATA TGGTTTTATC AATAAGAAGA ACCAGGTGGT GATTGCCCAG
AAATACGATA AGGCATATAC TTATACAAAA GGGAAGGGTA TGATCAGGCA GAATGGCAGG
GTTGGTTATG TGGATATAGA CGGTAATGAG ACCTGGGCAG AAGCTGCGCC GATATTACCC
GCTTCACATG GGGCTGATAA ATAA
 
Protein sequence
MKKYPILLCL LFPALMGYSQ TLTSAAKAGG DTLSLVKIEK AGKYGFTDTS GKVVIAPVYD 
AIGPFQHGLA VVQKGKKTGY LLPNGKTSSL KYDSAWVKEG RYHFVKLDGK VGLLDDQGKE
LVAPKYEEVN GIRDGYVSVK QGGKYGVINP QGKMVLKPVY ERLGFVTNGT MLVYIDGKCG
RADLLKGKVV MTSYEKVGPF RDGMAWVRQD KKFGFINADG DLVIPVMYDW VGNFNEGLVA
VATEKKYGFI NKKNQVVIAQ KYDKAYTYTK GKGMIRQNGR VGYVDIDGNE TWAEAAPILP
ASHGADK