Gene Cpin_7246 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_7246 
Symbol 
ID8363440 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp9056130 
End bp9056480 
Gene Length351 bp 
Protein Length116 aa 
Translation table11 
GC content41% 
IMG OID644969380 
Producttranscriptional regulator, HxlR family 
Protein accessionYP_003126847 
Protein GI256426194 
COG category[K] Transcription 
COG ID[COG1733] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00534813 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.675501 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAATT GTGTGATTGA CATTGATGAT ATGCAGTTTA TTCTCCAGGT ATTAGGAGGA 
AAATGGAAGT TGCATATTCT CACTACCCTC TATTTCGGCA AGAAAAGGTT CAAAGAATTG
GAGCGTGAGA TAACAGGCAT TTCACCCAAG ATGTTAATAA AGGAACTGAA AGAACTGGAA
GCAGCAGGCA TTGTTGACCG ACAAACATTT AATACAGTTC CCATTACAGT TGAATACAGT
CTGACAGAAG ACGGCCTCAC ATTGAAGCCG GTCCTGGAAC ACATGAAAAC CTGGGCAACT
ACATTCAGGG AAACACAGCA GGTGAAAACA ATGACTGCTT CAGCTTTATA A
 
Protein sequence
MENCVIDIDD MQFILQVLGG KWKLHILTTL YFGKKRFKEL EREITGISPK MLIKELKELE 
AAGIVDRQTF NTVPITVEYS LTEDGLTLKP VLEHMKTWAT TFRETQQVKT MTASAL