Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_7246 |
Symbol | |
ID | 8363440 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 9056130 |
End bp | 9056480 |
Gene Length | 351 bp |
Protein Length | 116 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 644969380 |
Product | transcriptional regulator, HxlR family |
Protein accession | YP_003126847 |
Protein GI | 256426194 |
COG category | [K] Transcription |
COG ID | [COG1733] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00534813 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.675501 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAAATT GTGTGATTGA CATTGATGAT ATGCAGTTTA TTCTCCAGGT ATTAGGAGGA AAATGGAAGT TGCATATTCT CACTACCCTC TATTTCGGCA AGAAAAGGTT CAAAGAATTG GAGCGTGAGA TAACAGGCAT TTCACCCAAG ATGTTAATAA AGGAACTGAA AGAACTGGAA GCAGCAGGCA TTGTTGACCG ACAAACATTT AATACAGTTC CCATTACAGT TGAATACAGT CTGACAGAAG ACGGCCTCAC ATTGAAGCCG GTCCTGGAAC ACATGAAAAC CTGGGCAACT ACATTCAGGG AAACACAGCA GGTGAAAACA ATGACTGCTT CAGCTTTATA A
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Protein sequence | MENCVIDIDD MQFILQVLGG KWKLHILTTL YFGKKRFKEL EREITGISPK MLIKELKELE AAGIVDRQTF NTVPITVEYS LTEDGLTLKP VLEHMKTWAT TFRETQQVKT MTASAL
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