| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_7233 |
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| Symbol | |
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| ID | 8363427 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 9037371 |
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| End bp | 9038987 |
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| Gene Length | 1617 bp |
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| Protein Length | 538 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644969367 |
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| Product | RagB/SusD domain protein |
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| Protein accession | YP_003126834 |
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| Protein GI | 256426181 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000822173 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACATA CTGCAAAAAA AATCTTACTG GCTACACTGA TTGTGCTGTG TAGCTGTACC
AAACTGAAAG ATGATAGTTA TAATCAGATC ATCGCCGGAC AATTTGAACC TACCGCACAG
GATCTGGCAT CGCTGGTAGG CGCTGCTTAC GTGAACTGGC GTATTGTATT AAATGGATGG
AATGGATATG CGCGTATCCA GGAAGCGACA TCAGATGAAG CCGTAGTGCC GGCAAGACCC
AATGGCTGGG TTGATGGTGG TATCTACCGT CGTTTACATG AACATAAATG GACCTCGGAT
GATGATGTAA CGATCAATAC CTGGGGGCGT ACATATGCAG GGATCACTAA CTGTAACCGG
GTCATTTATC AGCTGGAATC AGGTGCGATA CCGGTTACCA GTGGTAAGGA AGAAACACTG
GCCGAACTGA AGGTGCTGCG GGCTTCTTAT TACTATGTAT TGTGTGATGT ATATGGCAAT
GTACCGATTG TGACGGACTT TAATGTTGCT GATGGCTACC TGCCTGAGCA GCGCACAAGA
AAAGAAGTAT ACGATTTCAT CATCAAAGAG ATAAAAGATA ATATCGGTTT ACTGAGTGAT
AAGAATGATA AATCCACTTA CGGTAAATTT AATAAATGGG CGGCTTATGC CTTACTGGCC
AAGATGTATA TCAATGCGGA AGTCTATACC GGTACTGCTG CCTGGAGTGA TTGTATTACG
GCCTGTGATG CGATCATCAA CTCAGGAAAA GGATTTATCC TGGAACCGAT ACAGCGGAAC
CTGTTTGTGA CAGAGAATGA AAATTCAAAA GAAATCATCT TCGCATTACC TTTTGATGAA
ACATATGTGA CTGACTGGAA TGCATTTGAT ATACATATGC AGACATTGCA ACCGGCCAGT
CAGGCGACTT ACAACCTGAA GTCTACGCCA TGGGGGGGTA TCTGCGCGAT TCCGCAGTTT
ATTAACACCT TTGATCAGAA TGATGCCCGC TATCGGGATA ACTGGATCAA GGGACAGCAA
TACAGTGCCG CAGGAGAACC GCTTAACTGT ACAATGGGCG CTTATACCGG CAAACCGCTG
GCATTTGTAA ATGAAGTACC TGGTATCGAT CTTTCAGAAG AAATCCACGG TTTTCGTTTA
GGTAAATTTG AGATCAAGCA GAATGCGAAC GTGCAGCTTA GTAATGACTG GCCCTTATTC
AGGTATGCAG ACATCCTGAT GATGAAAGCA GAGTGTCTGA TGAGGGATGG AAAGGCGGCC
GCTGCTGCCG GGCTGGTGAC GGAAGTAAGA CGCCGCAACT TCACAGATCA CCCGGAAAAG
GCGATTGTAA CAGCCGCTGA TCTGGTGAAA GGAAGTGTGT ATAACTATGG TCTGCGCAAT
CACCTGAATC AAACGATAGA AGGTGGCGAC AACGTACAAT ACGGCCGCTT CCTGGATGAA
CTGGGATGGG AGTTTAACCA GGAAGATCGT CGCAGACAGG ACATGATCCG TTTTAAAGTG
TTTACAAAGA AAGCCTGGTT CTCACATTTG CCAAATGGTG ATTATCGTAC GCTCTTTCCA
ATTCCCCGTA TTGAAATCAA CAAGAACGGC AACCTGAAGC AGAATACTGG TTACTAA
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| Protein sequence | MKHTAKKILL ATLIVLCSCT KLKDDSYNQI IAGQFEPTAQ DLASLVGAAY VNWRIVLNGW
NGYARIQEAT SDEAVVPARP NGWVDGGIYR RLHEHKWTSD DDVTINTWGR TYAGITNCNR
VIYQLESGAI PVTSGKEETL AELKVLRASY YYVLCDVYGN VPIVTDFNVA DGYLPEQRTR
KEVYDFIIKE IKDNIGLLSD KNDKSTYGKF NKWAAYALLA KMYINAEVYT GTAAWSDCIT
ACDAIINSGK GFILEPIQRN LFVTENENSK EIIFALPFDE TYVTDWNAFD IHMQTLQPAS
QATYNLKSTP WGGICAIPQF INTFDQNDAR YRDNWIKGQQ YSAAGEPLNC TMGAYTGKPL
AFVNEVPGID LSEEIHGFRL GKFEIKQNAN VQLSNDWPLF RYADILMMKA ECLMRDGKAA
AAAGLVTEVR RRNFTDHPEK AIVTAADLVK GSVYNYGLRN HLNQTIEGGD NVQYGRFLDE
LGWEFNQEDR RRQDMIRFKV FTKKAWFSHL PNGDYRTLFP IPRIEINKNG NLKQNTGY
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