Gene Cpin_7230 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_7230 
Symbol 
ID8363424 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp9033647 
End bp9034669 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content48% 
IMG OID644969364 
Productdihydroorotate dehydrogenase 2 
Protein accessionYP_003126831 
Protein GI256426178 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0167] Dihydroorotate dehydrogenase 
TIGRFAM ID[TIGR01036] dihydroorotate dehydrogenase, subfamily 2 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.892577 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACAATT TTATCAAGAA TATACTCTTC CGCTTTCCTC CGGAAAGCAT CCATTACCAG 
GTAATGAAGG GCCTGCAAAT CATGCATGGT CTTCCCCTGG GAAAAAATAT ACTCCACTCC
TTTTGTCAGC CGAAACGTAA AGGACTGGAA AGACAACTCT GGGGACTGAC CTTTAAAAAC
CCGGTCGGAC TAGCCGCTGG TTTTGACAAG GACGCCCGTT TTACCGACGA ACTGGCCAGC
CTGGGCTTCG GCTTTGTAGA AATCGGTACG GTTACCCCGG TATCCCAGCC GGGTAATGAT
CAGCCACGTC TGTTCCGCCT GCCGGCAGAC AAAGCGCTTA TCAACCGTAT GGGTTTCAAT
AACGGAGGTG CTATTGCAGC TGCTAAACGC CTGCAAAAAA GAAAATCCGA TATCATCATC
GGAGGTAATA TCGGTAAGAA CAAGATCACA CCTAACGAAG AAGCGATCAG TGATTACGAG
AAATGTTTCC ATGCCCTGTT TGATGTAGTG GATTACTTCG TTGTGAATGT AAGTTCTCCG
AATACGCCGA ATCTACGCGC ATTACAGGAA AAAGAACCAC TGAAACAGCT GTTGCATCAC
CTGCAGACGC TGAACAACCA GAAAAGCAAG CCAAAACCAA TCCTGCTGAA AATAGCACCG
GACCTGACCA CCAGTCAGCT GGATGATATC ATAGAAATTG TACAGGAAAC CAAACTGGCA
GGTATCGTAG CGACCAATAC AACTATTGAC CGCTCCAACC TGGAAACGCC TGCTGCGGAA
GTGGAAGCGA TCGGTGCAGG TGGACTTAGC GGTCTGCCGG TAAAAGAGAA AGCAACAGAA
GTAATCCGCT ATATCCATAA AAATACCAAT GGCGCCGTAC CGATCATTGC GGTAGGTGGT
ATCTTCACCG CTGCTGACGC CCAGGAAAAA CTGGATGCCG GCGCCTCGCT GGTACAGGTC
TATACAGGCT TCGTATATGA AGGCCCGGCG ATCGTTAAGA AGATATGTGA AGGATTACGT
TAA
 
Protein sequence
MYNFIKNILF RFPPESIHYQ VMKGLQIMHG LPLGKNILHS FCQPKRKGLE RQLWGLTFKN 
PVGLAAGFDK DARFTDELAS LGFGFVEIGT VTPVSQPGND QPRLFRLPAD KALINRMGFN
NGGAIAAAKR LQKRKSDIII GGNIGKNKIT PNEEAISDYE KCFHALFDVV DYFVVNVSSP
NTPNLRALQE KEPLKQLLHH LQTLNNQKSK PKPILLKIAP DLTTSQLDDI IEIVQETKLA
GIVATNTTID RSNLETPAAE VEAIGAGGLS GLPVKEKATE VIRYIHKNTN GAVPIIAVGG
IFTAADAQEK LDAGASLVQV YTGFVYEGPA IVKKICEGLR