Gene Cpin_7173 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_7173 
Symbol 
ID8363367 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp8957589 
End bp8958977 
Gene Length1389 bp 
Protein Length462 aa 
Translation table11 
GC content47% 
IMG OID644969307 
Productvon Willebrand factor type A 
Protein accessionYP_003126774 
Protein GI256426121 
COG category[R] General function prediction only 
COG ID[COG2304] Uncharacterized protein containing a von Willebrand factor type A (vWA) domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00690211 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGTATG CCTTACTTTT CCTTGCAAGT TTATCAGTAC CTGTGTGGCT GAGTTCCGGT 
CCGGGCATTT CCAGCCGTCG TACGGAGAAA ATAGCTTCCG CGCTGACAGA CGATAAAAAG
GTCATCGAAT GGTATGTGAA GCCGGGTAAC AATTGGGTAT ATCAGAACAG CAACGGCGAT
TGCTATCTGT ATGTCAATAT CAAAGGCGGG GAGGGAGAGG CGAGTAAGCC AAGGGTGCCG
CTGAATATAT CACTGGTGCT GGACAGAAGT GGTTCCATGA GTGGGGACAA GATCAAATAC
GCCAGACAGG CCGCAAAATT CCTGATAGAT CAGCTGAATA GCACGGATCA TCTGTCGATC
GTCAACTATG ATGACCGGGT AGAGGTGACC AGTCCTTCTC AGTCTGTTAA AAACAAAGAA
GCGCTGAAGG CCGCTATCGA TAAGATCCAC GACCGTGGCT CTACTAACCT GAGCGGTGGT
ATGCTGGAAG GCTATACACA GGTGAAAAGT ACCCGTAAAG AAGGATATGT GAACAGGGTG
CTGTTACTGA CAGACGGGCT TGCCAATCAG GGGATTACAG ATCCGCTGGA ATTGAAAAGA
CTGGCTGAGA ACAAGTATAA GGAAGATGGT ATCGCGTTAT CCACCTTTGG TGTGGGAGCA
GACTATAACG AAGACCTGCT GACCATGCTG GCGGAAAATG GCCGGGCGAA TTATTACTTT
ATTGACAGTC CGGATAAGAT CCCACAAATA TTCGCCGGGG AATTAAAAGG GTTGCTGAGC
GTCGTGGCAC AGAACGCCTG GGCGGAAATC AGTATTCCGC AGGATATGGA ATGTACATAT
GTGTATGGCT ATCCTTACGA AGTAAAGGGA GGTAAGGTCC TGGTCCGTTT TAACGATCTC
TATGCGAATG ATGAAAAGGC CATCCTGATC AAATTGAAGA GTAAGGGCAC CTATACGACG
AATCTGCGTT TTGACTGTAC TGTGGGGTAT ACCAATGTTT CTTCCTTTGA ACAGGTAAAA
GAAAGTAAAC CAGTGCAGAT AAAGATGACC AGCGATAAAG AACTGGTGGC AAGCGGAGAG
GATAAAGAAG TGCAGGAAAT GCTGGCATTG TTTGAATCCA CCCAGCGCTT TGATGATATC
ATGGCCGATG TGGATAAAGG TCAATACGAT GCAGCCCGTA AGAAAGGACA GGCGGCTGTG
CAGGTGCTGA AGGATAAACA GCTCCGGTAT AATTCTCCTA AGCTGCAGGA GCAGGTCAAT
AAAATGTCCT CCTATGTACA GCAGATGGAT TCTGTGAGTG TGATGCGGGA ATCTGAGAAG
AGTATGTATC AGAAGATGAA TAAGTCTTCC AACTACAATG TGAAAAAGAT GAAGAGTGTT
AAACAATAA
 
Protein sequence
MQYALLFLAS LSVPVWLSSG PGISSRRTEK IASALTDDKK VIEWYVKPGN NWVYQNSNGD 
CYLYVNIKGG EGEASKPRVP LNISLVLDRS GSMSGDKIKY ARQAAKFLID QLNSTDHLSI
VNYDDRVEVT SPSQSVKNKE ALKAAIDKIH DRGSTNLSGG MLEGYTQVKS TRKEGYVNRV
LLLTDGLANQ GITDPLELKR LAENKYKEDG IALSTFGVGA DYNEDLLTML AENGRANYYF
IDSPDKIPQI FAGELKGLLS VVAQNAWAEI SIPQDMECTY VYGYPYEVKG GKVLVRFNDL
YANDEKAILI KLKSKGTYTT NLRFDCTVGY TNVSSFEQVK ESKPVQIKMT SDKELVASGE
DKEVQEMLAL FESTQRFDDI MADVDKGQYD AARKKGQAAV QVLKDKQLRY NSPKLQEQVN
KMSSYVQQMD SVSVMRESEK SMYQKMNKSS NYNVKKMKSV KQ