| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_7123 |
|---|
| Symbol | |
|---|
| ID | 8363316 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | + |
|---|
| Start bp | 8912207 |
|---|
| End bp | 8912785 |
|---|
| Gene Length | 579 bp |
|---|
| Protein Length | 192 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 644969257 |
|---|
| Product | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen |
|---|
| Protein accession | YP_003126725 |
|---|
| Protein GI | 256426072 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1225] Peroxiredoxin |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 48 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATTTAA AAATCAACCA GCCCGCGCCA GATTTCATTA CCCGGGACAT TTGGGGGAAT
ACGGTGCAGC TCAGCCAGCT GCGGGAACAA AAGGTACTAC TGACATTCTA CCGGCATGTT
GCCTGCCCGG TTAATCACTT GCGCTTTCAG GAACTGAGAA CGTATGAAAA GGAGTTCTGT
AAAAAGAAGC TGGCCGTACT GGCAGTGTAT GAGAGCAGCA AAGACAACCT GCTGCGTTAT
AGTGAAGATG AAAATTATTA CGCCAGGTTA ATAGCTAACC CGGAGTTTGA TCTCTACGAA
AAGTATGATA TAGAGCTGAA CACGCTCAAG CTATTATTCT CTATGTACAA TGGAGGTCCG
GCAAAAGCCG CAGAAGGGTT AAAACTGATG AAACATCGTT TCAAGGCAGA GGGACATAAC
AATCTGATGG GAGGGGACTT TCTCATTGGC GAAGACGGCC TCCTGAAACA GGTGTATTAC
AACCAGTTCC TGGGAGACCA TCTGCCAACG AAAGAAATAC TGGCATTCAT TAATGATCCT
GATTATAAAG TCATCGGTTC ATCCACTTGT TGCGATTAA
|
|---|
| Protein sequence | MNLKINQPAP DFITRDIWGN TVQLSQLREQ KVLLTFYRHV ACPVNHLRFQ ELRTYEKEFC
KKKLAVLAVY ESSKDNLLRY SEDENYYARL IANPEFDLYE KYDIELNTLK LLFSMYNGGP
AKAAEGLKLM KHRFKAEGHN NLMGGDFLIG EDGLLKQVYY NQFLGDHLPT KEILAFINDP
DYKVIGSSTC CD
|
|---|
| |