Gene Cpin_7118 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_7118 
Symbol 
ID8363311 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp8907906 
End bp8908421 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content48% 
IMG OID644969252 
Productmethionine-R-sulfoxide reductase 
Protein accessionYP_003126720 
Protein GI256426067 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0229] Conserved domain frequently associated with peptide methionine sulfoxide reductase 
TIGRFAM ID[TIGR00357] methionine-R-sulfoxide reductase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAGA TCCTGATTTA TAGCGCCCTG CTGATGTTGA TTAGTATCAG CAGCTTCGCC 
CAGAATGAAA AATCTACCCG GGGACACGAA AACAATCCCT GGTATTCCAA CACAGACACA
TCCAGGCTGA CGGTAAGTAA CGTAGAATGG AAAAAGGTGC TTCCGGGCGC CCTTTATGCC
GTCGCAAGGG AAAAAGATAC AGAAAGACCA TTTACCGGTA AATACTGGAA AAGCACAACC
CGTGGCACCT ATTATTGTGC TGTTTGCGGC AACCTGCTGT TCCGCTCGGA CGCAAAATTT
GCCAGCAGCT GCGGATGGCC CAGTTTCTAC GAACCAAAGC GCGCAAGTGC CGTACGTTAC
CAGGAAGATT ACTCTGTCGG TATGCACCGG ACGGAAGTAT TGTGCGGGCG TTGTGATTCC
CATCTCGGAC ACATCTTCGA CGATGGTCCT GCACCTACTT ACAAGCGCTT TTGCATGAAC
TCGGTATCTC TTGATTTTGA ACCGGATAAA AAATAA
 
Protein sequence
MKKILIYSAL LMLISISSFA QNEKSTRGHE NNPWYSNTDT SRLTVSNVEW KKVLPGALYA 
VAREKDTERP FTGKYWKSTT RGTYYCAVCG NLLFRSDAKF ASSCGWPSFY EPKRASAVRY
QEDYSVGMHR TEVLCGRCDS HLGHIFDDGP APTYKRFCMN SVSLDFEPDK K