Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_7118 |
Symbol | |
ID | 8363311 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 8907906 |
End bp | 8908421 |
Gene Length | 516 bp |
Protein Length | 171 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 644969252 |
Product | methionine-R-sulfoxide reductase |
Protein accession | YP_003126720 |
Protein GI | 256426067 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0229] Conserved domain frequently associated with peptide methionine sulfoxide reductase |
TIGRFAM ID | [TIGR00357] methionine-R-sulfoxide reductase |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAGA TCCTGATTTA TAGCGCCCTG CTGATGTTGA TTAGTATCAG CAGCTTCGCC CAGAATGAAA AATCTACCCG GGGACACGAA AACAATCCCT GGTATTCCAA CACAGACACA TCCAGGCTGA CGGTAAGTAA CGTAGAATGG AAAAAGGTGC TTCCGGGCGC CCTTTATGCC GTCGCAAGGG AAAAAGATAC AGAAAGACCA TTTACCGGTA AATACTGGAA AAGCACAACC CGTGGCACCT ATTATTGTGC TGTTTGCGGC AACCTGCTGT TCCGCTCGGA CGCAAAATTT GCCAGCAGCT GCGGATGGCC CAGTTTCTAC GAACCAAAGC GCGCAAGTGC CGTACGTTAC CAGGAAGATT ACTCTGTCGG TATGCACCGG ACGGAAGTAT TGTGCGGGCG TTGTGATTCC CATCTCGGAC ACATCTTCGA CGATGGTCCT GCACCTACTT ACAAGCGCTT TTGCATGAAC TCGGTATCTC TTGATTTTGA ACCGGATAAA AAATAA
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Protein sequence | MKKILIYSAL LMLISISSFA QNEKSTRGHE NNPWYSNTDT SRLTVSNVEW KKVLPGALYA VAREKDTERP FTGKYWKSTT RGTYYCAVCG NLLFRSDAKF ASSCGWPSFY EPKRASAVRY QEDYSVGMHR TEVLCGRCDS HLGHIFDDGP APTYKRFCMN SVSLDFEPDK K
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