Gene Cpin_7116 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_7116 
Symbol 
ID8363309 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp8906805 
End bp8907290 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content44% 
IMG OID644969250 
Productthioredoxin domain protein 
Protein accessionYP_003126718 
Protein GI256426065 
COG category[C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG4232] Thiol:disulfide interchange protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAATTA AATTATTCAG ATCAGCTATG CTGGCAGGCT GCCTCGCACT GATCGCATCC 
GCTTATTCTT CCAGGGTCCT TGCACAGCAA AAAGCCCCGC AGGAAATCAA ATTCAGTTCC
AAAGCCTATA AAGAGGTATT GGCAACCGCT AAAGCCGCTC ACAAAAAAGT CTTTATAGAC
GCCTACGCTA CCTGGTGTGC GCCCTGTAAA GAACTCCGTA AACATACTTT TAACGATCCT
AAAGCCGCGG CCTATTTCAA TAAAAACTTT GTCAATTTCA CGATTGATGT TGAAAAAGGA
GAAGGTATAG CATTGGCAAA AACCTGGCAG GTAGACGGAC TGCCCACCTT ACTGATTGTT
GATGAAAAAG GTCAGGTACT GGCAAACCAC GTTGGATTTG TGGATGGAGA TGGTCTGATC
CAGTTTGCAA AAGAGGCAAC AGAAAATATA CAGTCAAAAG GCAGCAAACC CGCTTCTAAA
CGCTAA
 
Protein sequence
MRIKLFRSAM LAGCLALIAS AYSSRVLAQQ KAPQEIKFSS KAYKEVLATA KAAHKKVFID 
AYATWCAPCK ELRKHTFNDP KAAAYFNKNF VNFTIDVEKG EGIALAKTWQ VDGLPTLLIV
DEKGQVLANH VGFVDGDGLI QFAKEATENI QSKGSKPASK R