Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_7116 |
Symbol | |
ID | 8363309 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 8906805 |
End bp | 8907290 |
Gene Length | 486 bp |
Protein Length | 161 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 644969250 |
Product | thioredoxin domain protein |
Protein accession | YP_003126718 |
Protein GI | 256426065 |
COG category | [C] Energy production and conversion [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG4232] Thiol:disulfide interchange protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGAATTA AATTATTCAG ATCAGCTATG CTGGCAGGCT GCCTCGCACT GATCGCATCC GCTTATTCTT CCAGGGTCCT TGCACAGCAA AAAGCCCCGC AGGAAATCAA ATTCAGTTCC AAAGCCTATA AAGAGGTATT GGCAACCGCT AAAGCCGCTC ACAAAAAAGT CTTTATAGAC GCCTACGCTA CCTGGTGTGC GCCCTGTAAA GAACTCCGTA AACATACTTT TAACGATCCT AAAGCCGCGG CCTATTTCAA TAAAAACTTT GTCAATTTCA CGATTGATGT TGAAAAAGGA GAAGGTATAG CATTGGCAAA AACCTGGCAG GTAGACGGAC TGCCCACCTT ACTGATTGTT GATGAAAAAG GTCAGGTACT GGCAAACCAC GTTGGATTTG TGGATGGAGA TGGTCTGATC CAGTTTGCAA AAGAGGCAAC AGAAAATATA CAGTCAAAAG GCAGCAAACC CGCTTCTAAA CGCTAA
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Protein sequence | MRIKLFRSAM LAGCLALIAS AYSSRVLAQQ KAPQEIKFSS KAYKEVLATA KAAHKKVFID AYATWCAPCK ELRKHTFNDP KAAAYFNKNF VNFTIDVEKG EGIALAKTWQ VDGLPTLLIV DEKGQVLANH VGFVDGDGLI QFAKEATENI QSKGSKPASK R
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