| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_7078 |
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| Symbol | |
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| ID | 8363270 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 8854904 |
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| End bp | 8856379 |
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| Gene Length | 1476 bp |
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| Protein Length | 491 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644969211 |
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| Product | putative outer membrane protein |
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| Protein accession | YP_003126680 |
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| Protein GI | 256426027 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0823525 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTAAGA AACCTATTCT GTTTACGATC TGTGGATTGT TAACCTTTTC TGTTACCTGT
GCTCAGCAAA CATTGTCTTT GCAGGGAGTG GTCGTACAGG CACAGCAACA ATCGCCTTCT
TACTACAAAG CGCGCAGCAG TGCGCTGAAT AGTCTCTATG CCTTCAGATA CTATGTGGCA
GGCCGCCGTC CGCAATTAAA ACTGCAGGCT TCCAACAACA GTAGTTTTCT GGGTAATATT
GAAAGTATCC GTCAGCCGGA TGGTACCTAT GCTTTCAGCA AGAGTTCCTA TTCGTACACG
TTTACCAGTC TGGCGGCAGA CCAGATCGTT CCCTTTACCG GTGGACAATT CTCCGTTGCC
ACCAACCTGT CAAGGAATGA CGTATTTGAT CCGTCATCGA GTGTAGGGTA TCTTTCTACA
CCTTTTTCGA TCAGCTATTT TCAACCTACG CTTTTATACA ATCCCTATCG CTGGGATAGC
CGTATACAAC CTTTGCTGTA TGAGGAATCA AAGAAACAGT ACATCGAAAC ACTCGAAAGA
ACGGGGCTGC AGGCGGCCGG TTATTTCTTC GATGCATTGG TGGCTCAGCA ACAGGAGTTA
ATATTGCAAC AGAACGTTGC CAATACAGAT ACATTATACA AGATTTCGAA GGGAAGATAT
GAGTTGGGTA AGATCGCGGA GAACGAGTTA TTGCAGATAG AACTAAACCT GATCAATGCC
CGCAATAACC TGGAACAGGC TTCGCTGAGC AAGGAGATTG CCTATCGCGA ATTAACCCAG
TTCCTGACGC TACCCAAAGG TACTTCCGTG CAGGTTGCAT TACCGGATAC GATTCCAACG
CTGATGATTC CCGTGGATAT CGCACAAAGG GAAGCACAGG ATAATCGTCA GGCAGTGCTG
GCATTTCGTC GTCAGCGACT GGAAGCCGAA CAACAGGTAG CTGAAGCCAG GGGTAACAGC
GGTTACCAGT TAAACCTTTC GGCCAACTTC GGACAGGCAC GTCAGGGAGC TTCGCTTAAA
AACGCATATG GAGGCGGAAA TCTGCAGCAA ACCCAGTTAT TGAGCGTAGG GGTGTCAATT
CCGATTATGG ATTGGGGAAG GGCCCGTAAT CGCGTCAGAC AGGCAAAAGC AAACCAGGAA
CTGATAGAAA TAGATATACA GCAACAGGAA AGGAATTTCG AACAGGAGAT CTATTTACAG
ACACAGCAAT TCAACATCCA GCGCAAGCTG CTGGAAAGTG CGGCTAAAGC GGACACCATT
GCGAAACAGC GGTATGAGAT CACGAAACAG CGTTATTACA TTGGCAAAAT ATCCATTACA
GACCTCAATC TGGCCCAACA GGAAAAGGAT ATGGCTAATC AGAACTACAT TAATGCACTG
CGTTCTTTCT GGACCTCTTA CTATACGGTA CGTCTGTTAA CGCTGTACGA CTTTGAGAAG
GCCCAGAAAA TCAGATACGA GTTTAAAGAA AGATGA
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| Protein sequence | MIKKPILFTI CGLLTFSVTC AQQTLSLQGV VVQAQQQSPS YYKARSSALN SLYAFRYYVA
GRRPQLKLQA SNNSSFLGNI ESIRQPDGTY AFSKSSYSYT FTSLAADQIV PFTGGQFSVA
TNLSRNDVFD PSSSVGYLST PFSISYFQPT LLYNPYRWDS RIQPLLYEES KKQYIETLER
TGLQAAGYFF DALVAQQQEL ILQQNVANTD TLYKISKGRY ELGKIAENEL LQIELNLINA
RNNLEQASLS KEIAYRELTQ FLTLPKGTSV QVALPDTIPT LMIPVDIAQR EAQDNRQAVL
AFRRQRLEAE QQVAEARGNS GYQLNLSANF GQARQGASLK NAYGGGNLQQ TQLLSVGVSI
PIMDWGRARN RVRQAKANQE LIEIDIQQQE RNFEQEIYLQ TQQFNIQRKL LESAAKADTI
AKQRYEITKQ RYYIGKISIT DLNLAQQEKD MANQNYINAL RSFWTSYYTV RLLTLYDFEK
AQKIRYEFKE R
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