Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_7059 |
Symbol | surE |
ID | 8363251 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 8833257 |
End bp | 8834036 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 644969192 |
Product | stationary phase survival protein SurE |
Protein accession | YP_003126661 |
Protein GI | 256426008 |
COG category | [R] General function prediction only |
COG ID | [COG0496] Predicted acid phosphatase |
TIGRFAM ID | [TIGR00087] 5'/3'-nucleotidase SurE |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.478586 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 53 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAGGGTA AAGCGCAGGA AAAGATCATT CTGGTAACAA ACGATGATGG TGTAACAGCT CCGGGCATCC GGGCACTGAT TGAAGCGGTA AGTCCGCTGG GAAGAGTCGT GGTAGTGGCG CCGGATAGTC CGCAGTCAGG AAAGGGACAC GCTATTACGA TCGGCGTGCC GCTCCGTCTG GACCAGGTAG ATATCTTTGA CGGCATAGAA GCATGGCAAT GTTCCGGTAC ACCGGTAGAT TGTGTGAAGC TGGCCCGCGA CAAGATTCTG CACCGTTTGC CGGATATCTG TGTAAGTGGT ATCAATCATG GTGCGAACCA TTCCATTAAT GTGATTTATT CCGGCACCAT GTCAGCGGCA ATGGAAGCGG CCATTGAGGG CGTACCTTCA GTGGGTTTCT CTTACCTGGA CTACAGTTTT GATGCGGACT TCTCTTTATG TAAAGAAGTG GCTCATTCAG TGGCAAAGCA GATGCTGGAA ACGGAACTGC CGGAGGGTAC CCTGTTCAAT GTGAATATCC CTGTTGTTAA AAAAGAAGAC TATAAAGGAT TAAAGATATG TCGTCAGGCA GATGCGAAAT GGGTAGAAGC GTTTGACGAG CGCCGTGATC CGCGTGGTAA GAAATACTAC TGGCTCACCG GTGAATTCAC TAATCGCGAT AACGGAGAAG ATACTGACGT ATACGCCCTT GCAAATAACT ACGCTTCGCT TGTACCTGTG CAGTTCGATC TGACTGATTA TAAGATGAAA AAGAAGCTGG AAAACGACTG GAAACTCTGA
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Protein sequence | MKGKAQEKII LVTNDDGVTA PGIRALIEAV SPLGRVVVVA PDSPQSGKGH AITIGVPLRL DQVDIFDGIE AWQCSGTPVD CVKLARDKIL HRLPDICVSG INHGANHSIN VIYSGTMSAA MEAAIEGVPS VGFSYLDYSF DADFSLCKEV AHSVAKQMLE TELPEGTLFN VNIPVVKKED YKGLKICRQA DAKWVEAFDE RRDPRGKKYY WLTGEFTNRD NGEDTDVYAL ANNYASLVPV QFDLTDYKMK KKLENDWKL
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