| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_7057 |
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| Symbol | |
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| ID | 8363249 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 8831407 |
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| End bp | 8832510 |
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| Gene Length | 1104 bp |
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| Protein Length | 367 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644969190 |
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| Product | lipid-A-disaccharide synthase |
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| Protein accession | YP_003126659 |
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| Protein GI | 256426006 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0763] Lipid A disaccharide synthetase |
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| TIGRFAM ID | [TIGR00215] lipid-A-disaccharide synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.193202 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 57 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTACT ACATCATCGC CGGAGAAGCA TCCGGTGATC TCCATGGAAG CAATCTGATC
AAAGAATTGA AACAACAGGA CACCGCAGCG GATATCCGTT GCTGGGGAGG CGATATGATG
CAACAGGCTG GAGGAACGCT GGTGAAGCAT TATAAAGATC TGGCTTTTAT GGGGTTTATT
GAGGTGGTGA TGAACATCCG TACGGTATTA CGCAATATGG AGTTCTGCAA AAAGGACATT
CAGCAATACC AGCCGGATGT ACTGGTATTG ATTGACTACG CGGGGTTTAA TCTGCGTATT
GCGGAATGGG CAAAACCATT GGGATATAAG ATCGTGTTTT ATATTTCTCC GCAGGTATGG
GCCTGGAAGG AGAATCGCGT GAAGAAGATA AAACAGAGTG TGGATAAGAT GCTCTGCATC
CTGCCATTTG AACAGGATTT CTATAAGAAA TGGGATTACG AGGTAGAATA CGTAGGACAT
CCGTTGATAC AGGTGATCAG GGAGGCGAAA GAAAAGCCGG CTGATGCACC ATTGTCAGAC
AAGCCGGTGA TTGCCATTCT GCCGGGTAGC CGTAAGCAGG AAGTGAGCGT TAAGCTGCCG
ATCATGCTTA CCATGGCTAA ACATTTCCCG AATCATCAGT TTATAGTTGC GCAGGCCCCC
AGCCTGGACG ATGCATTTAT ACAGGGACTG ATCGGAGCCC ATCCGAATGT CTCTACTGTT
AAAGCACAAA CCTATACCTT ATTGCGTCAG GCAGAAGCCG CACTGGTGAC TTCCGGAACA
GCTACATTGG AGACTGCCCT GTTTGGCGTA CCTGAGGTAG TATGTTACAA GGGCAGTGCT
ATTTCCTATT TCTTTGCCAA GCGACTGATC AAGGTAAAAT ATATTGCACT GGTGAACCTC
GTGATGGATA AACCTGTTGT AAAAGAATTG ATTCAGCATG ATCTGACGGA AGAGAACCTG
CTGACAGAAC TGACTTTGTT GCTGAAGGAT AAGGCGGCGC GCGATCGTAT TAAAGCAGAT
TACGCAGCAT TGTGGACAAA ACTGGGAGAA AAAGATGCAA GTCGCCGGGC GGCAGAAATC
AGTTATGCCG AAGCGAAAAA ATAA
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| Protein sequence | MKYYIIAGEA SGDLHGSNLI KELKQQDTAA DIRCWGGDMM QQAGGTLVKH YKDLAFMGFI
EVVMNIRTVL RNMEFCKKDI QQYQPDVLVL IDYAGFNLRI AEWAKPLGYK IVFYISPQVW
AWKENRVKKI KQSVDKMLCI LPFEQDFYKK WDYEVEYVGH PLIQVIREAK EKPADAPLSD
KPVIAILPGS RKQEVSVKLP IMLTMAKHFP NHQFIVAQAP SLDDAFIQGL IGAHPNVSTV
KAQTYTLLRQ AEAALVTSGT ATLETALFGV PEVVCYKGSA ISYFFAKRLI KVKYIALVNL
VMDKPVVKEL IQHDLTEENL LTELTLLLKD KAARDRIKAD YAALWTKLGE KDASRRAAEI
SYAEAKK
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