Gene Cpin_7050 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_7050 
Symbol 
ID8363242 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp8821397 
End bp8822695 
Gene Length1299 bp 
Protein Length432 aa 
Translation table11 
GC content45% 
IMG OID644969183 
Productadenylosuccinate synthetase 
Protein accessionYP_003126652 
Protein GI256425999 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0104] Adenylosuccinate synthase 
TIGRFAM ID[TIGR00184] adenylosuccinate synthase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones57 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTAGATG TTTTGCTGGG CCTACAGTGG GGCGATGAAG GCAAAGGAAA GATTGTGGAT 
TATTTCGCAG GTAAATACGA TGTCATAGCC CGCTTTCAGG GTGGACCCAA CGCAGGGCAT
ACTTTATATG TGGATGGCCA GAAGGTAGTA TTACATACGA TTCCTTCAGG TGTATTCCAT
AAAAATACCA TTAACCTGAT CGGTAATGGC GTGGTACTGG ACCCTGTAAC TTTTAAAAAG
GAATGTGATA AGATCACCGC TCTTGGCGTG GATCTGAAAA AGAACCTTTT TATCGCGGAA
AGAACACATA TTATCGTTCC TTCTCACCGT GCCCTTGACA AGGCTTCAGA ACTGTCTAAA
GGCGCTGAAA AGATCGGTTC TACCCTGAAG GGTATCGGAC CTGCATATAT GGATAAAACA
GGCCGTAATG GTCTGAGAGT GGGTGATGTG CTGCGTAGCG ATTTCAATGA GCGTTATGCT
AAACTGAAAG AGAAACATCA GCATCTGCTG GCAGGTTATG ATTTCTCCGC AGAGATAAAA
GCTGAAATTG CGAAAGACAT TGCTGAATGG GAAGCTGAGT TCTTTGATGC AGTGACTTAC
CTGAAGCAGA TGAATATCGT TAATGGTGAG TACTTCATCA ACGAAAAACT GCAGGCTGGT
AAGAAAATCC TGGCTGAAGG AGCACAGGGT AGTATGCTGG ACGTAGATTT CGGTACTTAT
CCATTCGTTA CTTCTTCCAG TACTATCTCC GCCGGCGTAT GTTCCGGTCT GGGTGTAGCG
CCAAAATGGA TAAAAGAAGT GATCGGTGTA ACCAAAGCTT ATTGTACCCG TGTAGGTAGC
GGACCATTCC CTACAGAACT GCACGATGCA ACCGGTGAAA AACTGCGTGC AGAAGGTAAT
GAGTTTGGCG CGACTACCGG CCGTCCACGT CGTTGTGGCT GGATTGACCT GGTAGCCCTG
AACTATACCT GTATGCTGAG TGGTGTTACA CAACTGGTAA TGACCAAAAG CGACGTACTC
GACGCTTTCG ATGAAGTATA TGCATGTACT GCATATGAGA TCGATGGCCA GCAGACAAAG
GCAATGCCTT ATCAACTGAA CGAAACAGAC GTTAAACCCG TTTGGGAACA ACATAAAGGC
TGGAGCGATG AAACAGCAGC CAAAAGCAAG CATTTCAATG AATTGCCTGC CGAGATGAAA
TTATTCGTAA AAGCAGTAGA AAATTACCTG CAGGTACCGG TTAAATTTGT ATCAAATGGA
CCGGGCCGTG ATCAGATTCT GGAGCAGGAA AATGCTTAA
 
Protein sequence
MVDVLLGLQW GDEGKGKIVD YFAGKYDVIA RFQGGPNAGH TLYVDGQKVV LHTIPSGVFH 
KNTINLIGNG VVLDPVTFKK ECDKITALGV DLKKNLFIAE RTHIIVPSHR ALDKASELSK
GAEKIGSTLK GIGPAYMDKT GRNGLRVGDV LRSDFNERYA KLKEKHQHLL AGYDFSAEIK
AEIAKDIAEW EAEFFDAVTY LKQMNIVNGE YFINEKLQAG KKILAEGAQG SMLDVDFGTY
PFVTSSSTIS AGVCSGLGVA PKWIKEVIGV TKAYCTRVGS GPFPTELHDA TGEKLRAEGN
EFGATTGRPR RCGWIDLVAL NYTCMLSGVT QLVMTKSDVL DAFDEVYACT AYEIDGQQTK
AMPYQLNETD VKPVWEQHKG WSDETAAKSK HFNELPAEMK LFVKAVENYL QVPVKFVSNG
PGRDQILEQE NA