| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_7016 |
|---|
| Symbol | |
|---|
| ID | 8363208 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | - |
|---|
| Start bp | 8783925 |
|---|
| End bp | 8785139 |
|---|
| Gene Length | 1215 bp |
|---|
| Protein Length | 404 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 644969149 |
|---|
| Product | NADH dehydrogenase (quinone) |
|---|
| Protein accession | YP_003126618 |
|---|
| Protein GI | 256425965 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0649] NADH:ubiquinone oxidoreductase 49 kD subunit 7 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.650553 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCAGAGC AACATATCAC ACTGCCGGAA GGCTCTATTG AGAGGCAGAC ACAAACCCTT
AACCTGGGAC CTACGCACCC TGCTACACAC GGGGTATTTC AGAATATCCT GGAAATAGAC
GGTGAGCGTA TTGTGAGTTC GGAATCAACG GTAGGTTATA TCCACCGTGC ATTTGAGAAG
ATAGCAGAAC GTCGTCCTTA TTACCAGATT ACTCCTTTAA CAGACCGTCT GAACTATTGT
TCGTCGCCTA TTAATAACAT GGGATGGCAC ATGACGGTAG AAAAACTGCT GGGCATTCAG
ACGCCTAAGC GTGTGGACTA CCTCCGTGTT ATCATCATGG AACTGGCCCG TATCACTGAC
CACCTGATCT GTAATGGTGT GGTAGGTGTG GATAGCGGCG CCTTCACCGG CTTCCTTTAT
CTCATGAAAT ACCGTGAACT GGTATATGAG ATCTATGAGG AAATATGCGG TTCCCGTCTG
ACGACCAACA TCGGTCGCGT AGGCGGTTTT GAAAGAAACT TCACACCGGC TGCTTTTGAG
AAAATAGAAC GTTTTCTGAA AGAATACCCG GTAGCACTGA AGGAGTTCGA AACCATGATG
AACCGTAACC GTATTTTTAT GGAGAGGACG CAGGGTGTAG GACCGATCAG TGCTGAAAGA
GCCATCAACT ACGGTTTCAC CGGTCCAAAC CTGCGTGCAG CAGGCGTAGA CTACGACGTA
CGTGTGGCAC AGCCTTACTG CTCTTACGAA GATTTTGAAT TTACTATACC TGTAGGTACT
ACCGGCGACT GCTACGACCG TTTCCTGGTA CGTAACGCCG AAATGTGGGA AAGTCTGAGC
ATCATCCGTC AGGCGATGGA TAAACTGAAA GATCTGCCTT CAGACGTATA CCATGCAGAT
GTACCTGCTT ACTACCTGCC TGAGAAGAGC GCCGTATACA CCAAGATGGA AGCGCTCATC
TACCACTTCA AAATTATCAT GGGTGAATCT GATATCCTGC CGGGCGAATT ATACAATCCG
GTAGAAGGCG CGAATGGTGA GTTAGGATTC TATCTTATCA GCGATGGAGG CCGTAGTCCT
TACAGGCTGC ACTTCCGCCG CCCATGTTTC ATATATTACC AGGCTTACGC AGAACTGATC
AAAGGCGCGA TGCTGAGCGA TGCGGTTATC TGTATGAGTA GTCTGAATCT GATCGCAGGT
GAACTGGATG CTTAA
|
|---|
| Protein sequence | MSEQHITLPE GSIERQTQTL NLGPTHPATH GVFQNILEID GERIVSSEST VGYIHRAFEK
IAERRPYYQI TPLTDRLNYC SSPINNMGWH MTVEKLLGIQ TPKRVDYLRV IIMELARITD
HLICNGVVGV DSGAFTGFLY LMKYRELVYE IYEEICGSRL TTNIGRVGGF ERNFTPAAFE
KIERFLKEYP VALKEFETMM NRNRIFMERT QGVGPISAER AINYGFTGPN LRAAGVDYDV
RVAQPYCSYE DFEFTIPVGT TGDCYDRFLV RNAEMWESLS IIRQAMDKLK DLPSDVYHAD
VPAYYLPEKS AVYTKMEALI YHFKIIMGES DILPGELYNP VEGANGELGF YLISDGGRSP
YRLHFRRPCF IYYQAYAELI KGAMLSDAVI CMSSLNLIAG ELDA
|
|---|
| |