| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_7003 |
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| Symbol | |
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| ID | 8363195 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 8769970 |
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| End bp | 8771241 |
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| Gene Length | 1272 bp |
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| Protein Length | 423 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644969136 |
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| Product | protein of unknown function DUF214 |
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| Protein accession | YP_003126605 |
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| Protein GI | 256425952 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00437024 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGTTCC GTGACACATT TTCCCTCGCC TTTCGCTCTG TTAGCGGCAA TCGTTTGCGC
GCAGGGCTTA CTATTGCCAT CATCGGTTTT GGTATTATGG CCCTGGTGGG CATTTTTACG
GCCATTGACA GTATGAAAAG CAGTATTTAC AGCAGTTTTG CGAATATGGG GGCCAACAGC
TTCAATATAC AGAGCAGGGC GCTGAAGATA CGTATCGGCG GTGGCGGCGG TGCAACCAAA
GGAAGTAAGA AAACGAAGGT TAAAACCTCC AATAGTAATA TTCCCATTAC TTATAAGGAG
GCAATGGACT TCAAGCGGAA GTATGCTTTT CCTGCTACGG TGAGTGTGTC CACCAATGCA
ACGGGAAACG CGACAGTGTA TAAGAATGAT AAGAAGACGA ATCCGAATGT GCGTGTGATG
GGGGGCGATG AAAGTTATCT GCAGTTATCC AACTATACTT TGCGGGAAGG GCGTAATCTG
AATCAGCTGG ATGTAGAGTC AGGCAGAAAT GTGGCGATAC TGGGTATGGA TGTTGCGAAA
AAACTCTTTG GTGATAATCT GAAGAATGTC GTCAACAGTT CTATCCGTGT GGGAAATGTA
CGTTATCGTG TGGTGGGTGT GATGGCGCCT AAAGGGAACA GTGGTTTTAT GAGTGCGGAC
AATGTAGTGA TCACAACGGT GAATAATACA CGTAGAGTAT TTGACAGGCC GGGTGCTTCT
TACAATATCG GTATTTCAGT AAAAGATATC ACGAAGATGG ATGCTGCGAT CGGAGAGGCG
ACAGGACTGT TCAGGGTGGT TCGTCACCTG GCATTGAACG AGGAAGAAAA TTTTTATATC
AATAAAAGTG ACAGCATTGC AGAGATGCTG TTTGGTACAC TGAGTTACGT GGTGTTTGCG
GCTGTGCTGA TCGGCGCTAT TACTTTGTTT GGCTCGGCGA TCGGTCTGAC TAATATCATG
CTGGTATCAG TAGCGGAGCG TACCCGTGAG ATAGGTGTTA ATAAAGCACT GGGAGCAACC
AGTAAAGTGA TTCGTCAGCA GTTTGTATAC GAGTCTATTA TCATCAGTTT ACTGGGCGGC
GTACTGGGTG TTATACTTGG TATGCTGGTG GGTAATCTCG TATCATTGTT AACAGGATCG
AGTTTTATAG TTCCGTGGTT ATGGATAACG ACAGGGATAT TTATCTGTGC GGCCGTAGGG
TTGATATCAG GTATTTATCC AGCCATTAAG GCGTCACGTC TGGATCCGAT AGTTGCATTG
CGTTACGAAT AA
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| Protein sequence | MQFRDTFSLA FRSVSGNRLR AGLTIAIIGF GIMALVGIFT AIDSMKSSIY SSFANMGANS
FNIQSRALKI RIGGGGGATK GSKKTKVKTS NSNIPITYKE AMDFKRKYAF PATVSVSTNA
TGNATVYKND KKTNPNVRVM GGDESYLQLS NYTLREGRNL NQLDVESGRN VAILGMDVAK
KLFGDNLKNV VNSSIRVGNV RYRVVGVMAP KGNSGFMSAD NVVITTVNNT RRVFDRPGAS
YNIGISVKDI TKMDAAIGEA TGLFRVVRHL ALNEEENFYI NKSDSIAEML FGTLSYVVFA
AVLIGAITLF GSAIGLTNIM LVSVAERTRE IGVNKALGAT SKVIRQQFVY ESIIISLLGG
VLGVILGMLV GNLVSLLTGS SFIVPWLWIT TGIFICAAVG LISGIYPAIK ASRLDPIVAL
RYE
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