| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6988 |
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| Symbol | |
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| ID | 8363180 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 8753182 |
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| End bp | 8754147 |
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| Gene Length | 966 bp |
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| Protein Length | 321 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644969121 |
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| Product | Trans-hexaprenyltranstransferase |
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| Protein accession | YP_003126590 |
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| Protein GI | 256425937 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.955894 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.000428726 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGACGAAA TTAAACACCT GATCAGTAAG GAATTACAGG ATTTTGAAAG CAAATTCTCT
GACGCTGTAA AAAGTCATGT CCCATTGCTG GACAGGATCA TGCATTACAT CGTTAAACGT
AAAGGCAAGC AGATCAGACC CATGTTTGTG CTCCTATCGG CAAAACTCTT TAATAATAAT
ATACAGGAAA GCACATACAG AGCTGCAGCC CTGGTTGAAC TGCTTCATAC CGCCACTCTC
GTTCATGACG ACGTAGTGGA TGACGCCAAC GAAAGACGCG GCTTCTTTTC CATCAATGCA
CTGTGGAAAA ACAAAATAGC CGTGCTGGTA GGTGACTACC TCCTTTCTAA AGGATTACTG
CTTTCAGTAG ATAATAATGA ATTCAGATCT CTGAAGATCC TCTCAGAAGC CGTAAAGGAA
ATGAGTGAAG GTGAACTGCT CCAGATCGAA AAGACCCGTA AGCTGAATAT TAAAGAAGAT
ATCTATTTCG AAATCATCCG TCGTAAAACC GCCTCCCTCC TCGCCTCTGC CTGCGCAGCT
GGCGCCTGGA GCACCACCAA TGACGATGAA ACAACCGAAA AGATGCGCCT GTTCGGTGAA
AAAGTAGGTG TCGCCTTCCA GATCAAAGAT GACCTCTTCG ATTATGGCTC CGATAAAATC
GGTAAACCCA CCGGTATCGA TATCCGCGAG AAAAAAATGA CCCTCCCGCT CATTTATACC
CTCGAACACG CAACGCCTGA TATCCGCAGA CGTATTATTA ATATTGTCAA AAATCACAAC
ACCGATAAAG ACAAAGTCGC AGAAGTAATC GACCTGGTAA AAAAATCAGG TGGTATTGAA
TATACACAGG AGAAAATGTT CCAGTACCGC GATGAAGCAC TCGCCGTTCT GCATAGCTTC
CCGGCTAATG ATATCCGCGC CGGACTGGAA ACATTGGTTA GATATACAAC AGATCGTACT
TTTTAA
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| Protein sequence | MDEIKHLISK ELQDFESKFS DAVKSHVPLL DRIMHYIVKR KGKQIRPMFV LLSAKLFNNN
IQESTYRAAA LVELLHTATL VHDDVVDDAN ERRGFFSINA LWKNKIAVLV GDYLLSKGLL
LSVDNNEFRS LKILSEAVKE MSEGELLQIE KTRKLNIKED IYFEIIRRKT ASLLASACAA
GAWSTTNDDE TTEKMRLFGE KVGVAFQIKD DLFDYGSDKI GKPTGIDIRE KKMTLPLIYT
LEHATPDIRR RIINIVKNHN TDKDKVAEVI DLVKKSGGIE YTQEKMFQYR DEALAVLHSF
PANDIRAGLE TLVRYTTDRT F
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