Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_6958 |
Symbol | |
ID | 8363150 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 8719185 |
End bp | 8719835 |
Gene Length | 651 bp |
Protein Length | 216 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 644969091 |
Product | purine or other phosphorylase family 1 |
Protein accession | YP_003126560 |
Protein GI | 256425907 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0775] Nucleoside phosphorylase |
TIGRFAM ID | [TIGR03664] futalosine nucleosidase |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.514137 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAATTT TGGTCATCGC TGCCACTCCC TTTGAAATCC AACCACTTAT AGATCATCTG GCCGGTCGCC AATACCGGAA TTGTCAGATA AGCACGCTCG TTTGCGGTAT CGGTATGATG CACACTGCCT ACCAGTTGGG CCGGCAGTTC GCTGTCAGCA AACCCGACCT GGTCATACAG GCAGGTATCG CAGGCTGCTT CGATCATTCA TGGGAAATGG GAAAAGTAGT CGTCATTGAC CGCGAACAGC TGGGTGACCT CGGCGTAGAA GACGATCAGG CATATAAAGA TCTGTTTGAT ATACAGCTCT GGCAGCCGGA TCAGCCTCCC TTCACCAACC GTCAGCTGAT CAACACTTTC GATCGTGTAC CGCATCTTCC CGAACTGCCA AAAGCATCAG GCGTTACCAT TAACACCGTC AGCGGCAGCG AACGTACGCG TCAGGTGCTG CTCGATAAGT ATGCACCGGA AGTTGAAAGC ATGGAAGGCG CCGCTTTTCA CTATGCCTGT CTGCTGGAAA AAATACCCTT CTTCCAGCTC CGCAGCATCT CCAACTATGT GGAGGTAAGA GATAAAAGCA AATGGAAAAT ACCATTAGCA ATCCAGGTAT TGAATGAAGC ATTGATTAAA TATTTTGAAC GATGGAACTA A
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Protein sequence | MKILVIAATP FEIQPLIDHL AGRQYRNCQI STLVCGIGMM HTAYQLGRQF AVSKPDLVIQ AGIAGCFDHS WEMGKVVVID REQLGDLGVE DDQAYKDLFD IQLWQPDQPP FTNRQLINTF DRVPHLPELP KASGVTINTV SGSERTRQVL LDKYAPEVES MEGAAFHYAC LLEKIPFFQL RSISNYVEVR DKSKWKIPLA IQVLNEALIK YFERWN
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