Gene Cpin_6958 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_6958 
Symbol 
ID8363150 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp8719185 
End bp8719835 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content49% 
IMG OID644969091 
Productpurine or other phosphorylase family 1 
Protein accessionYP_003126560 
Protein GI256425907 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0775] Nucleoside phosphorylase 
TIGRFAM ID[TIGR03664] futalosine nucleosidase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.514137 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATTT TGGTCATCGC TGCCACTCCC TTTGAAATCC AACCACTTAT AGATCATCTG 
GCCGGTCGCC AATACCGGAA TTGTCAGATA AGCACGCTCG TTTGCGGTAT CGGTATGATG
CACACTGCCT ACCAGTTGGG CCGGCAGTTC GCTGTCAGCA AACCCGACCT GGTCATACAG
GCAGGTATCG CAGGCTGCTT CGATCATTCA TGGGAAATGG GAAAAGTAGT CGTCATTGAC
CGCGAACAGC TGGGTGACCT CGGCGTAGAA GACGATCAGG CATATAAAGA TCTGTTTGAT
ATACAGCTCT GGCAGCCGGA TCAGCCTCCC TTCACCAACC GTCAGCTGAT CAACACTTTC
GATCGTGTAC CGCATCTTCC CGAACTGCCA AAAGCATCAG GCGTTACCAT TAACACCGTC
AGCGGCAGCG AACGTACGCG TCAGGTGCTG CTCGATAAGT ATGCACCGGA AGTTGAAAGC
ATGGAAGGCG CCGCTTTTCA CTATGCCTGT CTGCTGGAAA AAATACCCTT CTTCCAGCTC
CGCAGCATCT CCAACTATGT GGAGGTAAGA GATAAAAGCA AATGGAAAAT ACCATTAGCA
ATCCAGGTAT TGAATGAAGC ATTGATTAAA TATTTTGAAC GATGGAACTA A
 
Protein sequence
MKILVIAATP FEIQPLIDHL AGRQYRNCQI STLVCGIGMM HTAYQLGRQF AVSKPDLVIQ 
AGIAGCFDHS WEMGKVVVID REQLGDLGVE DDQAYKDLFD IQLWQPDQPP FTNRQLINTF
DRVPHLPELP KASGVTINTV SGSERTRQVL LDKYAPEVES MEGAAFHYAC LLEKIPFFQL
RSISNYVEVR DKSKWKIPLA IQVLNEALIK YFERWN