Gene Cpin_6952 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_6952 
Symbol 
ID8363144 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp8715245 
End bp8715739 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content47% 
IMG OID644969085 
ProductDinB family protein 
Protein accessionYP_003126554 
Protein GI256425901 
COG category[S] Function unknown 
COG ID[COG2318] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.78845 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGATA TCCTGCTCAG CTATGCAGCT TATAACCTTT GGGCTAACAA TAAGATAGCG 
GATGTATTAA AAAAGCTACC GGATACACAG CTGGACCAGG AAACAGGCAG CAGCTTCGGC
ACCTTACGTA AGACGGTTTA CCATATGTGG GATGTGGAAA GTTTGTGGTA CCAGCGTTTA
CATCTGGTAG AACAGGCGGT TAAACCCTCG CTCACATTTG AAGGCTCCTT TACAGATGCC
TGTGCCCGCT GGCAGGAACA GTCGGTGAAG CTTGCAGACT GGGTCAAGGC GGTACAGCCC
GTCAGGCTGC AACACGTGGT GGCTTATTAC GATACCCGGA AACAATATTG TAAATCAACC
GTTATAGAAA TACTGATGCA GGTGTTCAAT CATGCCACGT ATCATCGCGG TCAGCTTGTA
ACCCTGTTAC GGCAGGCCGG TATTAATAAA ATTCCCGTTA CTGACTACAG CGAGTTTACG
AGAGGCAGAA AATAA
 
Protein sequence
MKDILLSYAA YNLWANNKIA DVLKKLPDTQ LDQETGSSFG TLRKTVYHMW DVESLWYQRL 
HLVEQAVKPS LTFEGSFTDA CARWQEQSVK LADWVKAVQP VRLQHVVAYY DTRKQYCKST
VIEILMQVFN HATYHRGQLV TLLRQAGINK IPVTDYSEFT RGRK