| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6944 |
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| Symbol | |
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| ID | 8363136 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 8697892 |
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| End bp | 8700165 |
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| Gene Length | 2274 bp |
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| Protein Length | 757 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644969077 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_003126546 |
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| Protein GI | 256425893 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACATT TATTACTGAT AATAACGGGC GTATTATTCT TTATGCATTC ACACGCGCAG
GTGCAGGGCA GCGTGGTGGA TGCGCAGACA GGAGAGGTGC TGCCGGGTGT AACTGTGCAG
TTACTGCACG CTGATAAAGG TTGTCAGACA GACGCACGTG GCCGCTTCTT TTTACAACGG
GGCCGTGCCG ATGATTCTGT GAAAGTATCG TTTGTCGGTT ATCAGACGAG GAAGCTGACA
TTGTCTTCGC AATCTTCTGC TATCATTTCA CTGACACCGG CTACTGCCAG TCTGAATGAG
ATCATTGTAA CCAGCAGCCG CGATAAGCAA TCACGCACTG ATGCACCTAT TGCGATCAGC
ACCATTTCCA CCCAGGAAAT GAGAGATACC AAAGCCACTT CACTGGAACA ATTAATGAAT
AAGGTGAGTG GCGTATATAT GGTGGATCTC GGCAATGAAC AACACACGAT GGCCATCCGT
CAGCCTATCG GTTATAAGAG TTTGTTTCTA TATATGGAAG ACGGTATTCC CATCCGTACT
ACCGGCGATT TCAATCACAA TGCGCTGATT GAAATAAATA TGGCGGCATT GCGCAATATC
GAAGTTGTAA GAGGACCTGC ATCATCGCTG TATGGTAGTG AAGCGGTAGG TGGCGCGGTG
AACTTTATTA CCGCGGCTCC TTCGTTAAAA CCGATGGCAA GGGTACAGGC AGAGATCAGT
GATCGTGGAT ATAAACGTAC GGACTTCAGT GCTTCCAGTA CATTTAATAA ACTGGGTATT
GTTGTTGGCG GTTATTATGC CGATCAGCGG AATGGTTATA TGGATCATAG TGATTTTCAT
AAACTGGCCC TGACCGTAAG AGCAGATTAT CAGATCAGCG ATCGTACCAA ATGGATTAAC
TCAATGACGC TGATCGATTA TTATACAGAT CAGGTAGGTG GATTGGATAG CGCACATTTC
TATGCAAAAG ATTATCGCAA TTTTCAGACC TTCTCTTATC GTAAGGTCAA TGCATTACGT
TACAGAAGTA CGCTGGAACA AAACTGGAAC AATACTAACA AGACGACGGT GACTGCCTTC
TTCCGCAATA ATACCATTGA ACAAAATCCT TTCTATGCAC TAAAAAATCT TTCAGATCCG
CTGAAGGCGG CAGGTGAGAT CAATGATGAC AGTTTCAATA GTTATGCGCT GATCATTCAG
CATAAAAAAC AGTTTGCCTG GAAACATGCT TCTATCATTG CTGGTTTGAG TGCTGATTAT
AGTCCGGCGA CCTATTACGC TGAATTTATC GACGTCACAA AGGATGCTGC CGGTTATTTC
AGAAGTTACA AAACAACCGA TTCTGTATTG ACAGATTACA ATGTTGGTTT ACTGAATACC
GCCGCTTATG CACAATTTGA TATGGAGTTG GTAAGTCGTC TGAAATTAGT GGCAGCGGTA
CGTTACGACC GGATGGATTA TGATTTTGAC AATCATCTTG CACCATCTGC ATTTACCGGT
GCACCGGATG AAACCAATCA TTTCAATAAG CTGACGCCAA AGCTGGGATT GACTTATGAC
TTCGGACAAA ATCGTGGTAT GTATGCAAAT TACAGTGTGG GTTTTGCGCC ACCGAATATC
TCTGAGTTAT ACAGAGGAGT GAAAGTACCT GTACTGAAAC CAGCTACTTA TCGCAACTAT
GAAGCAGGCG GCTGGTTTGG TTTTGCAAAT GATAAAGGAT ATGTGGATAT CGGTGTGTAT
GATATGCAGG GAACAAATGA AATCATCAGT GTAAAACTGG ATGATGGATC TTATGAAAAT
CGTAATACGG GTCGTACGAC ACACAGAGGT ATTGAATGGA ATGTGCGTTA TGCGCCTTTG
CCATCTGTCT GGATCCGTTG CAGCGGACAA TACGCAGAGC ACTTCTTTAA TGAGTATGTG
GAAAAAGGGG TGAGTTATAA TGATAATAAA ATGGCGGGTG CACCGAAAGT AATTACGAAT
ACAGAGATCA CCTGGAAGCC CCGTTTTCTG AATGGATTTC GTCTTGCAGG AGAATGGCAG
CATGTAGGCA GTTATTACAT GGATCCACGC AATACAGGTG TCTATGGGGG ATATGATCTG
TTGAATTTCC GTACAGGGTA TAGCTGGAGA CAATTTGATT GTTGGGTGAA CTGCCGAAAT
GCGGGAGATG CTATTTATTC TACTACCACG GAAAGAACTA CTTACAGTAC GACATACAGA
CCGGGACCTA AACGTACTTT CAATATTGGT TTCGGATATA CTTTTAGGAA TTAG
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| Protein sequence | MKHLLLIITG VLFFMHSHAQ VQGSVVDAQT GEVLPGVTVQ LLHADKGCQT DARGRFFLQR
GRADDSVKVS FVGYQTRKLT LSSQSSAIIS LTPATASLNE IIVTSSRDKQ SRTDAPIAIS
TISTQEMRDT KATSLEQLMN KVSGVYMVDL GNEQHTMAIR QPIGYKSLFL YMEDGIPIRT
TGDFNHNALI EINMAALRNI EVVRGPASSL YGSEAVGGAV NFITAAPSLK PMARVQAEIS
DRGYKRTDFS ASSTFNKLGI VVGGYYADQR NGYMDHSDFH KLALTVRADY QISDRTKWIN
SMTLIDYYTD QVGGLDSAHF YAKDYRNFQT FSYRKVNALR YRSTLEQNWN NTNKTTVTAF
FRNNTIEQNP FYALKNLSDP LKAAGEINDD SFNSYALIIQ HKKQFAWKHA SIIAGLSADY
SPATYYAEFI DVTKDAAGYF RSYKTTDSVL TDYNVGLLNT AAYAQFDMEL VSRLKLVAAV
RYDRMDYDFD NHLAPSAFTG APDETNHFNK LTPKLGLTYD FGQNRGMYAN YSVGFAPPNI
SELYRGVKVP VLKPATYRNY EAGGWFGFAN DKGYVDIGVY DMQGTNEIIS VKLDDGSYEN
RNTGRTTHRG IEWNVRYAPL PSVWIRCSGQ YAEHFFNEYV EKGVSYNDNK MAGAPKVITN
TEITWKPRFL NGFRLAGEWQ HVGSYYMDPR NTGVYGGYDL LNFRTGYSWR QFDCWVNCRN
AGDAIYSTTT ERTTYSTTYR PGPKRTFNIG FGYTFRN
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