| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6939 |
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| Symbol | |
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| ID | 8363131 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 8690675 |
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| End bp | 8693335 |
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| Gene Length | 2661 bp |
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| Protein Length | 886 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644969072 |
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| Product | PKD domain containing protein |
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| Protein accession | YP_003126541 |
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| Protein GI | 256425888 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.105874 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAATGTGA AAAGGACCCT TAGACTATTG CTATTTATTC TCCTGATTGG AAACGTTACG
AAAGCCTCCC ACATTATCGG AGGTGAAATG TTTTATAAGT ATGTTTCCCG CAATACAACT
GATAATACGA TTACCTACCA GGTAACGTTA AAGCTGTTCC GTATCTGCGG CAGCGGACAG
AATATAGCAG AGTTGCCCGA TAAGGTCTAC TTCTCCATTT TCAATAAAGC CAGCAACACA
CCTTTCGATG CACCACTGGT AAGCAGGGCC ACCAAAGAAA CAAAAAACCT CGGACAGGTA
GATCCCTGTA TCGTGAATCC ACCGGATATC TGTTTCCAGA TCGGTACCTA TATTCACAAT
ATCACAGTGC CGGTTACCGG TAGCGGTTAT GTGGTGTCTT TCCAGAGCTG CTGCCGCGAT
AACTCTATGC AGAATATCGT GGATACACGT AATCCGAATA ATGAACAGCA ATTCCCTGGC
AACGGTGCCA CCTACTTCAC CGAATTACCA GGATCAACAG GTATTCTGGA TAACTCAAGC
CCTTACTTCG CAAAAGATGA AGCAGTACTG GTATGTGCTA ATAAGAAATT CTCCTATGAC
TTCTCTGCCA TAGATCCCAA CAGCGACAGC CTCGTATACA CCTTCTGTGA TGCATATGGC
GGTGGTTATA CCACCAACCA GACAGGTATC CCCAACCCTT CTGATGCACC GCCTTATAAC
TTTATTCCAT ATAAGAGTCC ATTCACCGGA TCAACTCCGC TGGGTATCGA TGCAGTCATT
GATCCGAAAA CAGGGGTGAT CTCCGGTATC GCTCCCAATG CCGGTAAATA TGTGGTGACC
GTCTGCGCCT CCGAATATCG CAATGGCACA CTACTCGGCA TCCACCGCAA AGATTTCCAC
ATCAACGTCA CTACCTGTGT GCGGGAAGTA GTTGCCGCCA TGCCGGAGAA ATATAATGAC
TGCTCCGGTT ATACCGTCAC ATTTATCAAC AATAGTACAG AAGGTAAAAC CTATGACTGG
GACTTCGGCG ATGGTCAGAA AGTAACGACC ACCAGCACGG CCGACTTACC ACATACCTAC
ACCCGGGACG GCACTTACAC CGTGAAACTC TGGGTAGATA AAAACAGTAA TTGCGGCGAC
AGCGCAACCG CAACAGCCTA TGTATACCCG ATGCTGCGGC CAGATCCCCG CATCAGCGGA
TTCTGTACCA ATACAACGAC TGTGTTCACC GATCGCTCTA CCACCTCCAG CGGCACTGAT
GCCATCAATT ATTACCGCTG GGATTTCGGT AATGAAGCAA CTGACGCCGA CACATCCCTC
CAGAAGAACG CAACTTATCA GTATCCTGGC CCAGGTAACT ATGACGTAGT CCTGCAGATA
AAGACCGTAC AGGGCTGTGA ACGTTTTGAT ACGACCAATA TCATTATATA TGATAAGCCA
CCGTTGAATA CGACTCCGGA TACCCTCCTC TGTATCCGTA ACTCCCTGCA GTTATTTGCA
GAAAGTCTGG TAGATGGGAA TGTGGTAACG GGTACCTACA CCTGGACACC AACCTATAAT
ATCACAAATG CCAACACGGC GACGCCTACC ATCTCACCGA AAAGAGATAC GACCTACACC
GTGACATTTA CAGATGCTAC TGGTTGTACC AATTCCAGAC AGGTGGCAAT AGATGTAAGA
GATACGCTTG TGATCAGAAC CATCGCCGAC AGCACCGTAT GTACCGGTGA TGAAGTGCAT
TTACGTGCCT TCCCTGATGG GGATTACCCG CTTACCTGGC ACAATGCGGC CACCAATACG
ATAGTAGGAG AAGGTCTTGT ACTCAACATC GTTCCTCCTT CACCTGCAGT TACATACACC
GTACGTGGAG AACTGGGTAG CTGTGACGGC TTCGATAATG TAAAACTGAC TGTCGTAGAT
CCTCCGGCTG CTTACGCAGG AGAAGATACT ACCATCTGTT ATGGAGAACA GGTCATCCTG
CGGGCATCAG GCGGCAGCAG CTATCAATGG TCGCCTACCA CAAACCTGAG CGCACCAGGA
AGCGCCAATA CCGCTGCAAG ACCTACGGAC ACTACACGAT ATATCGTTAC CGTTACGGAC
GTACTGGGTT GTCCCAAACC GGTGAACGAT ACGATACAGA TCAATGTAGT GCCGCCGGTA
CCTGCCTTCG CCGGTAATGA TACCATTGCC ATCCTGAATC AGCCATTCCA GCTGAATGCC
TCTGGTGGTA CCTCTTATGT GTGGACGCCA ACCGACGGAC TGGATCATCC GAATGTCTAT
AATCCGACTA CGACCATCAA TCACGATTTT ACTTATACCG TAACCGTCTA TACGGCTGAA
GGTTGTGTAG GCCGGGATAA CATCAGAATC CGCTTTATCG CAGGACCGGA TATCTATGTT
CCGACCGGAT TCTCACCTAA CGGAGACGGC CAGAACGATA TCTTCCGTCC GCTGCCTGTC
GGAATTGTAC AGATGGACTT TTTCAGAGTC TATGACCGCT GGGGAAAACT GATGTACAGC
ACTGACAAGT ATATGCAGGG ATGGGACGGC TACTTTAATG GCTCACCCGC CGCCGTTGGT
ACATACGTTT GGGTAGTCCA GGGTAAAAAT GTCAACGAGG AAACGGTAGT AAGAAAAGGT
ACAGTGACAC TGGTCAGATA G
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| Protein sequence | MNVKRTLRLL LFILLIGNVT KASHIIGGEM FYKYVSRNTT DNTITYQVTL KLFRICGSGQ
NIAELPDKVY FSIFNKASNT PFDAPLVSRA TKETKNLGQV DPCIVNPPDI CFQIGTYIHN
ITVPVTGSGY VVSFQSCCRD NSMQNIVDTR NPNNEQQFPG NGATYFTELP GSTGILDNSS
PYFAKDEAVL VCANKKFSYD FSAIDPNSDS LVYTFCDAYG GGYTTNQTGI PNPSDAPPYN
FIPYKSPFTG STPLGIDAVI DPKTGVISGI APNAGKYVVT VCASEYRNGT LLGIHRKDFH
INVTTCVREV VAAMPEKYND CSGYTVTFIN NSTEGKTYDW DFGDGQKVTT TSTADLPHTY
TRDGTYTVKL WVDKNSNCGD SATATAYVYP MLRPDPRISG FCTNTTTVFT DRSTTSSGTD
AINYYRWDFG NEATDADTSL QKNATYQYPG PGNYDVVLQI KTVQGCERFD TTNIIIYDKP
PLNTTPDTLL CIRNSLQLFA ESLVDGNVVT GTYTWTPTYN ITNANTATPT ISPKRDTTYT
VTFTDATGCT NSRQVAIDVR DTLVIRTIAD STVCTGDEVH LRAFPDGDYP LTWHNAATNT
IVGEGLVLNI VPPSPAVTYT VRGELGSCDG FDNVKLTVVD PPAAYAGEDT TICYGEQVIL
RASGGSSYQW SPTTNLSAPG SANTAARPTD TTRYIVTVTD VLGCPKPVND TIQINVVPPV
PAFAGNDTIA ILNQPFQLNA SGGTSYVWTP TDGLDHPNVY NPTTTINHDF TYTVTVYTAE
GCVGRDNIRI RFIAGPDIYV PTGFSPNGDG QNDIFRPLPV GIVQMDFFRV YDRWGKLMYS
TDKYMQGWDG YFNGSPAAVG TYVWVVQGKN VNEETVVRKG TVTLVR
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