| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6933 |
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| Symbol | |
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| ID | 8363125 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 8681120 |
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| End bp | 8683012 |
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| Gene Length | 1893 bp |
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| Protein Length | 630 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644969066 |
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| Product | OmpA/MotB domain protein |
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| Protein accession | YP_003126535 |
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| Protein GI | 256425882 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.453004 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAGTCC TCTTATTGAT ATGCTGTTGC TTAGCGTTAG GCCTGGAGAT GAATGCCCAG
GTGATAACCT ATGACAATGC AAAGAAAAAA GCACAGAAAA GTTTTGATGA TGCTCAGATG
GCCGTAAGGG AATATCGTAT GCTGGATGCG ATTGATCTGC TGAAAGACGC TGTAAGACAG
GAACCCGGTT TTACAGATGC TTATGGACAA ATGGTGATCA CCTACGTAGA GCTGAAAAAG
TACAAAGAAG CAATCATTAA TTTCGAAACA CTTAAAAGCC TGGACAGCCC TTCTATCCGG
CCTGCACTGC TGGCCTACTC CAAAGCGCTG GCAGGAGAAG GACGTTTCGC AGATGCACTC
ACTGCTGTTA CCATCTATAG TCAGACCGGT AAGACAAGAA GTGAGAAAGC AGAAGCCCTG
ATCAGAACCT ATACTTTCGC TGCCAAAGCA GCTGCCAAAC CGGTTCCTTT CAAACCAAAG
AACCTGGGAG ACAGCGTCAA CAGCAAAGAC CCTGAATATT TTCCTTCGCT CACCATTGAC
GGTCGTATGC TCGTCTTTAC ACGGCGTGTA AATAGCAAAA ACGAAGATTT CTATGTATCC
GAAAAAGACG ACAGCCTTGG CTGGATGCCG GCTTACAGTA TCGGTGCACC AGTAAACTCT
GCTAATAATG AAGGCGCTCA GAACGTATCC CTGGATGGTA ACATGCTGGT ATTCACCGGC
TGCGACTTTC CTGGTGGTAG AGGAAGCTGT GATATCTACT ACACTATCCG TACAGAAGAA
GGCTTATGGG TTGATCCGAT GAACCTCGGT TCTCCTATCA ACACCCGTGC ATGGGAATCC
CAGCCAAGTC TGTCTGCAGA TAAACAAACC CTTTACTTTG CCCGTGAAAC ACAGGATGCA
GGTTCTGATA TCTTCATGAG TAAAATGCAA CCTAACGGTA AATGGGGTTA TCCGGAAAGA
CTCGATTCCA ATATCAATAC AACCGGACGT GAAGCAACGC CTTTCATACA TCCTGACAAC
CAGACCCTGT ACTTCTCCTC CAACGGACAC CAGGGTTTTG GCGATATGGA CATTTTCGTA
TCCCGCCGTC AGCCTGATGG TAGCTGGGGA CCAGCCGTTA ACTTAGGTTA TCCTATCAAT
ACAGCTGACG AAGATGCAAG TCTGATTGTA GCTGCGGATG GTAAAACGGC TTATTTCGCT
TCCGACAGAT CTGATAGCCG CGGACAACTG GATCTCTACA GCTTCGAACT ATATCCGGAA
GTAAGACCAT TGAAAACACT CTACGTAAGT GGATTTGTTT ATGATGCAAA AACCCAGAAA
CGTCTGATAG CCAATATCGA AACTTACGAC CTTTCAACAG GGCAGGTAGC AGCAACTATC
CGCACAGACA AAGTAGGTAA TTTCATGGCG CCGTTACCAA CCGGAAAAGA CTATGCTTTC
AGCGTAAACC GCAAGGGTTA TCTGTTCTAT TCAGATAATT TCTCGCTGAA AAACGTCTCT
CCTGATTCAT CATTCTACAG AGAAATTGCT TTACAGCCAC TGGATACAAG TGCAGTACTC
GTACTGCATA ACATCTTCTT TGATACCCGA CAGTTCGCGC TCAAAACAGG TTCTGAACTG
GAGCTGAACA GACTTGTCGC ATTACTCAGA GAAAATCCGA CCGTTACAAT TGAAATCAGC
GGTCACACCG ATAATATCGG TAATACCAAA GACAACGTAT TACTGTCTGA ACGTCGTGCG
CAGGCGGTTG TGAAATACCT GGTAGATAAA GGCATTGCTG CTGAAAGATT ACAAGCCAAA
GGTTATGGAG AAACTAAACC GGTGGCGGAT AATATGACAG CTGCAGGTAG AGCGGAAAAC
AGAAGAACGG AGCTGAAAAT TCTTACTTTG TAA
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| Protein sequence | MRVLLLICCC LALGLEMNAQ VITYDNAKKK AQKSFDDAQM AVREYRMLDA IDLLKDAVRQ
EPGFTDAYGQ MVITYVELKK YKEAIINFET LKSLDSPSIR PALLAYSKAL AGEGRFADAL
TAVTIYSQTG KTRSEKAEAL IRTYTFAAKA AAKPVPFKPK NLGDSVNSKD PEYFPSLTID
GRMLVFTRRV NSKNEDFYVS EKDDSLGWMP AYSIGAPVNS ANNEGAQNVS LDGNMLVFTG
CDFPGGRGSC DIYYTIRTEE GLWVDPMNLG SPINTRAWES QPSLSADKQT LYFARETQDA
GSDIFMSKMQ PNGKWGYPER LDSNINTTGR EATPFIHPDN QTLYFSSNGH QGFGDMDIFV
SRRQPDGSWG PAVNLGYPIN TADEDASLIV AADGKTAYFA SDRSDSRGQL DLYSFELYPE
VRPLKTLYVS GFVYDAKTQK RLIANIETYD LSTGQVAATI RTDKVGNFMA PLPTGKDYAF
SVNRKGYLFY SDNFSLKNVS PDSSFYREIA LQPLDTSAVL VLHNIFFDTR QFALKTGSEL
ELNRLVALLR ENPTVTIEIS GHTDNIGNTK DNVLLSERRA QAVVKYLVDK GIAAERLQAK
GYGETKPVAD NMTAAGRAEN RRTELKILTL
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