Gene Cpin_6929 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_6929 
Symbol 
ID8363121 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp8675852 
End bp8677144 
Gene Length1293 bp 
Protein Length430 aa 
Translation table11 
GC content46% 
IMG OID644969062 
Productpeptidase M24 
Protein accessionYP_003126531 
Protein GI256425878 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0006] Xaa-Pro aminopeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.430082 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.840433 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAATT TACCATTAGA CTCTCAGATC TTCATTAAGA ATCGCCAGCG CTTTATTGCT 
GCCATGCAGC CGGATTCCAT TGCTATTATC AATTCCAATG ACGAATTGCC GACGAATGGA
GACGCATTGC ATAAATTCCA GCAGAATGCT GATCTGTATT GGTTGACCGG TATTGAGCAG
GAGGATACGA TGGTCATTTT ATGTCCTGAT AATCCGGATC CGAAATTCCG TGAAGTACTG
GTACTGGTAC GTCCGAATGA ACTGAAAGAG AAATGGGATG GACACAGACT GCGTAAAGAC
GAGGCTTTCG CCGTTTCAGG TATTTCTACC GTAGTGTGGC TGGACAGCCT GGATGCTATG
TTGCAACCCT GGATCCATGA TGTTACTAAC ATTTATCTGA ATACCAACGA GAATAACCGT
AAGTCAAGCC TGGTGCCTGT AAGGGATTAC CGTTATGCGG AAGAAATGCG TAGCCGTTAT
CCTTTGCATA ATTATCTGCG TGCAGCCGTT ATATTCAAGC AACTGCGCGC TGCAAAGACA
CCTGAGGAAG TGACTGTATT ACAGCACGCG ATCGATATTA CTGAAAAGAC TTTCCGCCGT
TTATTACAGT TCATCCGTCC TGGTGTATGG GAGCATGAAA TCCACGCGGA GATCCTGCAT
GAATTCCTGC GTAACAGGGC TGATGGTGAG GCATATGGCT CTATTATCGC CAGTGGCGAC
CGCGCACGCA TTCTCCACTA TATATTCAAT AACCAGGAAT GTAAAGATGG TGAACTGATC
CTGATGGACT TCGGCGCTGC CTATGGCGGT TATAACGCAG ATCTTACCCG TACAGTACCG
GTAAATGGCA AGTTTACTGC CCGTCAGCGT GAAGTATACG ATGCCTGTCT GCACCTGCAT
AACTATGCTA AAACCATCCT CCGTCCAGGT ATTACCATTG CGAAATATCA TGAAATGGTG
GGTGTGGAAG CCGGTAAGCA GTTTGTCAAA ATCGGCCTGC TGAAAGAGGA AGACATTAAA
AATCAGGATC CTGAAGTGCC AGCGTACCGC AAATACCTGT ACCATGGTAT TTCCCATCAC
CTGGGTGTGG GCGTACATGA CCTTGGACCG TCTTTCCACC AGCCGATTCC GGAGAATTCC
GTGATGACCA TAGAACCCGG TATCTATATT GAGGAAGAGA AAATGGGTAT TCGTATAGAG
AACAATATAT GGTTGACAGC AGGCGGTAAT GTGGACCTGA TGAGGAATAT TCCTATTACT
GCTGACGAGA TAGAGTCGTT GATGAAGAAA TAG
 
Protein sequence
MKNLPLDSQI FIKNRQRFIA AMQPDSIAII NSNDELPTNG DALHKFQQNA DLYWLTGIEQ 
EDTMVILCPD NPDPKFREVL VLVRPNELKE KWDGHRLRKD EAFAVSGIST VVWLDSLDAM
LQPWIHDVTN IYLNTNENNR KSSLVPVRDY RYAEEMRSRY PLHNYLRAAV IFKQLRAAKT
PEEVTVLQHA IDITEKTFRR LLQFIRPGVW EHEIHAEILH EFLRNRADGE AYGSIIASGD
RARILHYIFN NQECKDGELI LMDFGAAYGG YNADLTRTVP VNGKFTARQR EVYDACLHLH
NYAKTILRPG ITIAKYHEMV GVEAGKQFVK IGLLKEEDIK NQDPEVPAYR KYLYHGISHH
LGVGVHDLGP SFHQPIPENS VMTIEPGIYI EEEKMGIRIE NNIWLTAGGN VDLMRNIPIT
ADEIESLMKK