| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6919 |
|---|
| Symbol | |
|---|
| ID | 8363111 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | + |
|---|
| Start bp | 8667963 |
|---|
| End bp | 8669189 |
|---|
| Gene Length | 1227 bp |
|---|
| Protein Length | 408 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 644969052 |
|---|
| Product | glycosyl transferase family 2 |
|---|
| Protein accession | YP_003126521 |
|---|
| Protein GI | 256425868 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1215] Glycosyltransferases, probably involved in cell wall biogenesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 0.497978 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCATCT GGAAAAAGAC CCTGCCGGGG TCTAAAAATC TTTTTTTCCA CAGGACTATA
CAGATAATCA AAAACGTATA TATTTGCTAT GCTATGTTGT ATAACTTGGG CTTAATAGCC
TTTTACGCTT TTGCTACCGT GGCAGCCATA CAAATATTGT ATTACCTGAT CTTCTTTTCC
CGCGTAGCTT TTTATCGCCG TACCTTCGAA AGTGAAGTCG ATCCCGACGC GGAGTGCTCC
GTTATCATCT GCGCTAAAGA CGAAGAGCTG AATCTTCAGA AAAACCTGCC GGCTGTATTG
CAACAGCGCT ACCACGGCAA AAAGAAGCCA GCCTACGAAG TAATTGTCGT AAATGATAAT
TCCGAAGATG ACACCAAGTA CTACCTTCGC TCTATCGAAC CCGGTTATCC TCATTATCGC
CATATCGAGA TCAAACAGGC AGCCAAGTTC ATTCCCGGCA AAAAATTCCC GCTCTCTATG
GGCATCCGTA CTGCCAAACA CGAAAACATA CTGCTGACTG ACGCTGACTG CAAACCGTCC
AGTACGTATT GGCTGTCGCT CATGAGCCAG GGATTTACCG ATGGGAAAGA GATCGTACTG
GGCTACAGTC CGTATGAGAA AAAACCCGGT CTGCTGAACA AAGTGATCCG TTATGAAACT
TACTTCAGCG CTTTACAATA TCTCTCCTTC GCCCTCAGCG GCATCACCTA CATGGGTGTA
GGCCGTAACC TGGCATACAA ACGTGAACTG TTCAACCGTC ATAAAGGGTT TACCGCCCAC
CATCATATTG CTTCCGGCGA TGATGACCTG TTTGTAAATG CGGCTGCTAC CCGTCACAAT
GTGAGTGTGG TGATCGATAA GCAGGCATTT ACCTATTCTG AGCCAAAAAC TACCTGGAAA
AAATGGTTTC AGCAGAAGAC AAGGCATATG TCCACCGGCA AGCACTACCG CTTCGGCCAT
AAGGTATTGC TGGGTTTATT TTCACTGACA CATTTCCTGT TTTATCCGCT GTTCATCGGC
TGTCTGTTTT ATGAACCACT GCGTATCTAC ACACTGAGCG TTTTCGGCGG AAAACTGCTG
TTACAGTCTG TTATCTCCTT TATGGCGATG CGTAAGCTGG ACGAGGGCGA CCTCTTTAAA
TTCAGCTGGT TTATGGACTT TTTCATGTTC GTTTATTACC TGTTCCTGAC ACCTGCCCTG
ATGTTCAAGT CCAAGAACAG ATGGTAA
|
|---|
| Protein sequence | MAIWKKTLPG SKNLFFHRTI QIIKNVYICY AMLYNLGLIA FYAFATVAAI QILYYLIFFS
RVAFYRRTFE SEVDPDAECS VIICAKDEEL NLQKNLPAVL QQRYHGKKKP AYEVIVVNDN
SEDDTKYYLR SIEPGYPHYR HIEIKQAAKF IPGKKFPLSM GIRTAKHENI LLTDADCKPS
STYWLSLMSQ GFTDGKEIVL GYSPYEKKPG LLNKVIRYET YFSALQYLSF ALSGITYMGV
GRNLAYKREL FNRHKGFTAH HHIASGDDDL FVNAAATRHN VSVVIDKQAF TYSEPKTTWK
KWFQQKTRHM STGKHYRFGH KVLLGLFSLT HFLFYPLFIG CLFYEPLRIY TLSVFGGKLL
LQSVISFMAM RKLDEGDLFK FSWFMDFFMF VYYLFLTPAL MFKSKNRW
|
|---|
| |