Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_6917 |
Symbol | |
ID | 8363109 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 8665629 |
End bp | 8666708 |
Gene Length | 1080 bp |
Protein Length | 359 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 644969050 |
Product | permease YjgP/YjgQ family protein |
Protein accession | YP_003126519 |
Protein GI | 256425866 |
COG category | [R] General function prediction only |
COG ID | [COG0795] Predicted permeases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.186439 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.723746 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAAAGA TAGACTGGTA TATCCTACGT AAGTTCATAG GTACCTTCAT TTACTCCCTC ATGATCCTGC TCGTCATTTC CGTGGTGATA GACGTGACGG AGAAGATCGA TGACTTCATG AGCAACAACC TGTCTTTTTA CACGATTGTG GTAGATTACT ACTTCGGCTT TATCCCGCAT ATCGCCGCAT TGTTGTTTCC CTTGTTCATT TTCATTTCCG TGATCTTTTT CACTTCCAAA ATGGCCTATC GTACGGAGAT CGTCGCCATT CTGTGTAGTG GGGTAAGTTT CCGTCGTTTC CTGCGGCCAT ACTGGGTCGG CGCCTTCCTG TTTGGCGGTT TGCTGTGGCT GGGAAACCGC TGGACAGTAC CGGTTGCCAA TAAGATCAGG ACCAAATTTG AAGCAGAATA TGTGCATAAG AAGAAGGCAC AGCTCAACAT GTATGATAAA ACCATCCGTG TAGACAGCTT TACCTACGTG ACCTTTGGTT CTTATGACCC TAACTATAAA AGCGGCAGCA ACTTCCTGTA TGAAGATGTG CGTGGCCAGA ACATCAAATT CAAGATGAAG GCTGACAGGA TCAGCTGGGA CTCTGTGGCC GGAAAATGGA AGCTGGACTA TGTGACCATG CGTGCCATCA ATGGCCTGAA GGAACGCTGG TGGTCCAAAA CAGATACCAC CATTAAGATC CCGCTGAATC CGAAAGAGAT GTATGAGGAG AAAAATATTC AGGAGGCGAT GACAACGCCC GAACTGGATA CCTATATTGC CAGGGAGGAG TTGAAAGGAG CAGAGGGGCT GAATACATTC TACGTTGAAA AATACAGACG TACTGCTTCC TCCGGAGCTG TGGTGATCCT GACCCTGATC GGCGGGATTA TTGCTTCCAA AAAAGTGAGG GGAGGTAGTG GGCTGCACCT GGCTGTCGGG ATAGTGATCA GCGCCAGCTA TATTATCTTC CTGCAGTTTT CCACGGTATT TTCCATCAAG GCAGACCTGA ATCCCTTACT GGCAGTATGG ATTCCGAACT TCCTTTTCGG CGGATTAGCC TTCTGGCTAT ACCTGCGGGC GCCGAAATAG
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Protein sequence | MTKIDWYILR KFIGTFIYSL MILLVISVVI DVTEKIDDFM SNNLSFYTIV VDYYFGFIPH IAALLFPLFI FISVIFFTSK MAYRTEIVAI LCSGVSFRRF LRPYWVGAFL FGGLLWLGNR WTVPVANKIR TKFEAEYVHK KKAQLNMYDK TIRVDSFTYV TFGSYDPNYK SGSNFLYEDV RGQNIKFKMK ADRISWDSVA GKWKLDYVTM RAINGLKERW WSKTDTTIKI PLNPKEMYEE KNIQEAMTTP ELDTYIAREE LKGAEGLNTF YVEKYRRTAS SGAVVILTLI GGIIASKKVR GGSGLHLAVG IVISASYIIF LQFSTVFSIK ADLNPLLAVW IPNFLFGGLA FWLYLRAPK
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