| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6903 |
|---|
| Symbol | |
|---|
| ID | 8363095 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | - |
|---|
| Start bp | 8645318 |
|---|
| End bp | 8646490 |
|---|
| Gene Length | 1173 bp |
|---|
| Protein Length | 390 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 644969036 |
|---|
| Product | putative RNA methylase |
|---|
| Protein accession | YP_003126505 |
|---|
| Protein GI | 256425852 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1092] Predicted SAM-dependent methyltransferases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0358341 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.255977 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCAAAG TTTTTTTAAA GAAAAAGATA CAAAACCGTG TGCTGCAGGG CCACCCTTGG
GTGTTTGGGA ATGAAGTCGG ACAGATCGAA GGGCCTGTAA CAGCCGGTGA TACGGTAGAT
GTATTTACCC ATCAGGGATT CTTTGTTGGT AGAGGATACA TCAATCCCCA GTCACAGATC
CTGGTACGCC TGCTGACCCG TGACAAAGAC GAGCAGATTG ACGCGGAATT CTTCTACCGT
CGTTTGCTGA AAGCCTGGAA ATACCGTCAG CAGCTGGGAT ATGTGGAAAA CTGCCGTCTC
GTATTCGGAG AGGCCGACGA AATGCCGGCA CTGGTAATTG ACAAGTTCAA TGACCACTTC
GTAATACAGA CACTGGCATT GGGTATGGAC CGCTGGAAAG GCGCCATTGT GGACGCCCTG
AACAGGATCT TCTCTCCAAA AGGCATCTAC GAGCGTAACG ACGTTCCGGT ACGTGAACTG
GAAGGTCTGG AACAGCAGAA AGGATTCCTG AGCGCTCCTT TTGATACCAA TGTTATTATC
AATGAGAACG GTCTGAAATT CCATGTAGAT ATCGAAAATG GCCAGAAAAC AGGCTATTTC
CTGGATCAGC AGGATAACCG CCGCGCTATT CAGCATATCG TGAAGGGTGC GGATGTACTG
GAAGCATTCT GCTATACCGG TACTTTCTCC TGCCATGCTG GTCACTATGG CGCTAAAAGC
GTACTCGGAC TGGACATCTC TGAACATGCC GTTAACACTG CCCGCAGAAA TGCGGAGCTG
AACAACCTGC AGGATATCTG TAAGTTCCAG GCAGTGAACG CATTTGATGT GCTGAAGCAG
TGGACCCGTG AAGAGAAGAA GTTTGATACC GTGATCCTGG ATCCGCCAGC TTTTACCAAA
AGCCGCGAGA ATATCCAGAA AGCCATCACT GGTTATAAAG AGATCAACCT GCGTGGTATG
AAGCTGCTGA AACCGGGAGG CTTCCTGGTG ACTGCGTCCT GTACCAACCT GGTGCCGCCG
TCCCTCTTCC TGGAGATCAT CGATATGGCA GCCAAGGATG CTAAAAAGAA ACTGCGTCAG
GTAACCTTCC AGACACAGGC ACAGGATCAC CCGATCTTGT GGAATATTGA AAATACCACC
TACCTGAAAT TCCTGATCGT GGAAGTACAG TAA
|
|---|
| Protein sequence | MTKVFLKKKI QNRVLQGHPW VFGNEVGQIE GPVTAGDTVD VFTHQGFFVG RGYINPQSQI
LVRLLTRDKD EQIDAEFFYR RLLKAWKYRQ QLGYVENCRL VFGEADEMPA LVIDKFNDHF
VIQTLALGMD RWKGAIVDAL NRIFSPKGIY ERNDVPVREL EGLEQQKGFL SAPFDTNVII
NENGLKFHVD IENGQKTGYF LDQQDNRRAI QHIVKGADVL EAFCYTGTFS CHAGHYGAKS
VLGLDISEHA VNTARRNAEL NNLQDICKFQ AVNAFDVLKQ WTREEKKFDT VILDPPAFTK
SRENIQKAIT GYKEINLRGM KLLKPGGFLV TASCTNLVPP SLFLEIIDMA AKDAKKKLRQ
VTFQTQAQDH PILWNIENTT YLKFLIVEVQ
|
|---|
| |