| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6888 |
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| Symbol | |
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| ID | 8363080 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 8626699 |
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| End bp | 8627415 |
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| Gene Length | 717 bp |
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| Protein Length | 238 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644969021 |
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| Product | ABC transporter related |
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| Protein accession | YP_003126490 |
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| Protein GI | 256425837 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.228229 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACCCAA GTTCCGTCAT CCATTTAGAA CACATCCGTA AGAGCTATTT CATTGGAAAA
AATGAACTGC CTGTACTGAA AGGAATCAAT CTGGACATTT TAAAAAATGA GTACGTAGCG
CTGATGGGAC CTTCCGGTTC CGGCAAATCC ACGCTGATGA ATATGCTCGG CTGTCTTGAC
AGTCCGACCA GCGGAAAATA TGTACTGAGT GGCCATGATG TGAGCCAGAT GGAAGACGAT
GCGCTGGCAA GGGTGCGTAA TAAAGAAATC GGCTTTGTAT TTCAGCAGTT TAACCTGATG
CCGCGTCTCA GCGCATTAGA AAATGTGGCA GTACCGCTGA TCTATGCCGG TATTAACAAA
AAAGACCGGG AAGACAAAGC CCGCTTTATG CTGGAAAAAG TGGGTCTCGG ACAGCGTTAC
AAGCACAGAC CCAATGAGTT ATCCGGAGGT CAGTGTCAGC GTGTCGCGAT CGCCCGCGCC
CTGGTAAATG ATCCCTCCCT GATACTCGCC GATGAACCCA CAGGTAACCT CGATACCAAA
ACTTCCATAG AAATCATGGA TATCTTCGGT AGTATCCACG CCTCCGGTAA TACGGTCGTG
CTGGTCACCC ACGAAGAAGA TATCGCCGCT CATGCCCGCC GTGTGGTACG TCTGCGTGAC
GGATTAATAG AATCTGACAG ACTGAACGCG GAAATCCTCG CAGAAGCAGT GAAATAA
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| Protein sequence | MHPSSVIHLE HIRKSYFIGK NELPVLKGIN LDILKNEYVA LMGPSGSGKS TLMNMLGCLD
SPTSGKYVLS GHDVSQMEDD ALARVRNKEI GFVFQQFNLM PRLSALENVA VPLIYAGINK
KDREDKARFM LEKVGLGQRY KHRPNELSGG QCQRVAIARA LVNDPSLILA DEPTGNLDTK
TSIEIMDIFG SIHASGNTVV LVTHEEDIAA HARRVVRLRD GLIESDRLNA EILAEAVK
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