| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6872 |
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| Symbol | |
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| ID | 8363064 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 8603242 |
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| End bp | 8606190 |
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| Gene Length | 2949 bp |
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| Protein Length | 982 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644969005 |
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| Product | DNA polymerase III, alpha subunit |
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| Protein accession | YP_003126474 |
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| Protein GI | 256425821 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0587] DNA polymerase III, alpha subunit |
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| TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.430284 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTATCTGA ATTGCAAAAC TTTCTTCAGC CTCCGTTACG GCACCATCGA TACAAAAGAA
CTGGTGAAAA CAGCACGGCA GATGGGCATC ACCTCACTGG CGCTCACTAA TATCAATATC
ACTTCAGATA CCTGGAACTT TGTGAAGGAA TGCCAGGATA ATGGGATCAA ACCCATTATC
GGACTGGAAT GCAGAAACAA TCACGACCTT AAATACATCC TGCTGGCCCG TAATATGGAA
GGTTGGTTTT ATATCAACAG ATTTCTGTCA GATCATCTGC ATAAAGACCT CCCCTTTCCT
GATCGCGCAC CCGCTTTCCC GGGCGTATTT GCTATCTATA CCTGGAATAC CGTTCCGCTC
CAGGATCTCT ACGAACATGA ACTCGTCGGC ATCCGCAAGC GGGATATCAA CAAACTATTC
CGGGTAGATA CCTTATGCTG TCAGGATAAA CTCGTCATCC TTCACCCTGT TACTTTTCAG
AATGCAGACT ACTATCACCT CCATCGCATC CTACGCGCTG TCGATCAGAA TATCCTGATC
AGCCAGTTGC AGGATCATAC GGCCGCACAT ACAGATGAAA TGTTCATATC GCCCGGCGAC
TTATTCGACA GCTTTGAACA ATATCCGCAT ATTATCAGCA ATACAGTGCG TGTCATGGAC
GCCTGTCAGA TCAGCTTCGA CTTTAAATCT CCGCGTAATA AAAAGTACTT CACCACCAGC
GAAGCAGAAG ACCATGCACT CCTGCGGAAA CTCGCATATG AAGGCATGCT CGAACGTTAC
GGACCGGATA ACACAGAAGC AAAAGAGCGT ATAGAAAAAG AACTGGATGT AGTACAAGGC
CAGCATTTCA ATGGTTATTT TCTCATTACC TGGGATATCA TCCGTTATGC ACAGGAACGT
GGATTCTTCT ATGTAGGCCG GGGTAGCGGC GCTAATTCCA TCATCGCATA TTGCCTGAAA
ATAACTGACG TCGATCCCAT AGAACTGAAT CTTTATTTTG AAAGATTCCT CAATCCTTAT
CGTAGCTCTC CGCCTGATTT TGACATTGAT TTCTCCTGGA AAGACAGAGA TGAAATCATT
GCATATGTAT TCAAAAAATA TGGCACTGCA CATACTGCGC TTTTAGGCAC CGTCACTACA
TTCCAGCAGA ATGCCACGAT ACGTGAACTA GGTAAGGTAT ACGGTTTGCC CAAGCAGGAA
ATAGATAAGA TCCTGGATAC ACCATTTAAT CCTGATCTCT CCGGCGATAG CGTACAGCAG
AAAATCCTGC GCTATAGTCA GCTGATGTCC AATGATAACA AAGCTTTCCC TAATCACCTC
AGCATTCATG CCGGAGGTAT ACTTATCAGT GAAGCGCCTA TTCATCAGCA TTGCAGCACC
TATCTTCCAC CTAAAGGATT CAGCACCGCA CAACTGGACA TGCACCAGGC AGAAGCCATC
GGGTTATTTA AATTCGATAT TCTGAGTCAG CGGGGTCTCG GACATATACG TGATGCCATC
AGCATTATCC GGGAAAACAA AGGTGATGAT ATCGATATCC ACAATGTAAA AGCATTCATG
CGCGATGAAC GTGTTAAACA TGCCCTACAG ACTGTTAATA CCATCGGCTG TTTCTATATC
GAATCGCCTG CTATGCGGCA GCTACTCCTG AAACTTGAAT GCCATGATTA TCTGACACTG
GTAGCTGCCA GTTCAGTCAT ACGTCCCGGC GTAGCGCAAT CAGGTATGAT GCGGCAATAT
GTGCATAACT ACCGTCATCA GGACCAGGTT GTTTATCTCC ATGAGATCGT GAAAGAAGTA
TTGAGTGAAA CCTTCGGCAT CATGGTCTAC CAGGAAGATG TAATTAAGAT TGTCAGCAGG
TATGCAAATA TGGACCTGGC AGATGCAGAC ATCTTACGCA GGGCGATGGC TGGTAAATAC
CGTGGTCAGG GAGATTTTCA GAAAATAGAA CAACAATTTT TCAATAACTG TAAAAAACTC
GGCCGACCAG ATGCTGTCAC AGCAGAGCTC TGGCGACAGA TCGCCAGCTT TTCCGGTTTC
TCTTTTTCAA AAGCACACTC TGCGAGTTTT GCGGTGGAGA GCTATCAGAG CCTGTACCTG
AAAACATATT ATCCGGCAGA GTTCATGGTT GCAGTGATTA ATAACTTCGG CGGCTTTTAT
AACAGGGAAC TGTATTTCCG GGAGCTACAG AAGACCGGTG TGACCATTAA ACCGCCCTGT
ATCAATAACA GCGATTATTA CACGCGTATA AACGACGACA TTGTATATAC AGGTTTTATT
CATGTCGAAG GACTGGAAGT AAAGTGGATG GAACGGGTAT TGGAAGAACG CGGTCAATAT
GGCCCTTATG CCAGTCTGGA AGACTTCGCT ACCCGCATAG CACCTCCGCC GGAACAACTG
GATATTCTCA TCAGAATAGG CGCCTTTAGC TTCGATACTT ATACAAAGAA AGAATTACTG
TGGAAAAGCA GCCTGTTATT GAAAGCGAAG TCGCCGCATG CCGAGCATAT ACAGCCCTTA
TTCCGCGAGG AATTACCAGA CTGTCAGTTA CCCATGCTGG CCTATACGGC ACATGAAAAT
GCCTTTGAAG AAATTGCACT GCTGGGATTT CCATTGTGCT CTCCTTTCAC CATTCTGCAA
CATGATCAAA GCAGGTATAT TACTGCGAAT AATTTCAGGC AGTACACCGG ACAAACGATC
AATGCACTGG GTTATCTCGT CTGTACCAAA GGGATCCATA CCAGCAAAGG TATTCCTATG
AGTTTCGGAA CCTTTATGGA CGCAAACGGA GACTTTATCG ATACCGTACA TTTCCCGGAT
ATCCTGCGCA AATACCCCTT CCAGAAAGGC GGATTTTACA TGTTACAGGG AAAGGTTACA
GAAGAATATG GGGTGTTCTC TATAGAGATC GGCTATATGC GGAAGATCGG TTACTTTGAA
GACAAATAA
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| Protein sequence | MYLNCKTFFS LRYGTIDTKE LVKTARQMGI TSLALTNINI TSDTWNFVKE CQDNGIKPII
GLECRNNHDL KYILLARNME GWFYINRFLS DHLHKDLPFP DRAPAFPGVF AIYTWNTVPL
QDLYEHELVG IRKRDINKLF RVDTLCCQDK LVILHPVTFQ NADYYHLHRI LRAVDQNILI
SQLQDHTAAH TDEMFISPGD LFDSFEQYPH IISNTVRVMD ACQISFDFKS PRNKKYFTTS
EAEDHALLRK LAYEGMLERY GPDNTEAKER IEKELDVVQG QHFNGYFLIT WDIIRYAQER
GFFYVGRGSG ANSIIAYCLK ITDVDPIELN LYFERFLNPY RSSPPDFDID FSWKDRDEII
AYVFKKYGTA HTALLGTVTT FQQNATIREL GKVYGLPKQE IDKILDTPFN PDLSGDSVQQ
KILRYSQLMS NDNKAFPNHL SIHAGGILIS EAPIHQHCST YLPPKGFSTA QLDMHQAEAI
GLFKFDILSQ RGLGHIRDAI SIIRENKGDD IDIHNVKAFM RDERVKHALQ TVNTIGCFYI
ESPAMRQLLL KLECHDYLTL VAASSVIRPG VAQSGMMRQY VHNYRHQDQV VYLHEIVKEV
LSETFGIMVY QEDVIKIVSR YANMDLADAD ILRRAMAGKY RGQGDFQKIE QQFFNNCKKL
GRPDAVTAEL WRQIASFSGF SFSKAHSASF AVESYQSLYL KTYYPAEFMV AVINNFGGFY
NRELYFRELQ KTGVTIKPPC INNSDYYTRI NDDIVYTGFI HVEGLEVKWM ERVLEERGQY
GPYASLEDFA TRIAPPPEQL DILIRIGAFS FDTYTKKELL WKSSLLLKAK SPHAEHIQPL
FREELPDCQL PMLAYTAHEN AFEEIALLGF PLCSPFTILQ HDQSRYITAN NFRQYTGQTI
NALGYLVCTK GIHTSKGIPM SFGTFMDANG DFIDTVHFPD ILRKYPFQKG GFYMLQGKVT
EEYGVFSIEI GYMRKIGYFE DK
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