Gene Cpin_6853 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_6853 
Symbol 
ID8363045 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp8584266 
End bp8584985 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content48% 
IMG OID644968986 
Producthypothetical protein 
Protein accessionYP_003126455 
Protein GI256425802 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.730342 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAAG TCCTTTATGT TTCAGGATTA ACCCTTTTAT TGTTTGCCCT GCAGAGCTGC 
GGAGGCCGTC GCCTGAAAGG CAGCGGTAAC GTCTCTACGG AAACCCGTTC AATCGGAGGA
TCTTATAGTA AAGTAGCCCT GAAGGGGTCC ATGGATGTGG AATTTACCCA GGGACCTGCC
CAGGCGGCCA TTATTGAAGC GGATGACAAT ATCCTGCCGT ATATCGAACT GGCTGTGCAT
GACGATGAGC TGGTGGTGGA TATGAAAGAC GATATCTCTA TCAAGTCGCA TCACGGCATC
AAGATAAAAT TAACAGCCCC TGACGTTTAT GAACTGTCTC TGGCAGGAAG TGGTAATATT
ATAGTTACCA ATACCCTGGA AAGTACAGAA CCGGTGCGCT TTAAGTTATC CGGTGCAGGT
AATGTGGACG CAACGGTGAA TAGTCCGCAG GTCATTGCTT CTTCTGCTGG TTCCGGCGAC
ATTAAACTGA AAGGTGAAAC AAAAGATCTG GAGGTAAGTA TGGCAGGAAG CGGTAATTTT
GAAGGCGGTG AGCTGCATAC AGAAACGACC AAAGTGACCA TAGCCGGTAG CGGTAACGCG
GATGTTCATG CCAGCGTGAA ACTGAATGCG AAGATCGTTG GATCGGGAGA TGTGAGCTAT
AAGGGAAGTC CTGAAGTGAC CTCCAGTATT GCCGGCTCAG GGTCTGTACA CAAGGATTAA
 
Protein sequence
MKKVLYVSGL TLLLFALQSC GGRRLKGSGN VSTETRSIGG SYSKVALKGS MDVEFTQGPA 
QAAIIEADDN ILPYIELAVH DDELVVDMKD DISIKSHHGI KIKLTAPDVY ELSLAGSGNI
IVTNTLESTE PVRFKLSGAG NVDATVNSPQ VIASSAGSGD IKLKGETKDL EVSMAGSGNF
EGGELHTETT KVTIAGSGNA DVHASVKLNA KIVGSGDVSY KGSPEVTSSI AGSGSVHKD