| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6823 |
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| Symbol | |
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| ID | 8363015 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 8547839 |
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| End bp | 8549038 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644968956 |
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| Product | glycosyl hydrolase family 88 |
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| Protein accession | YP_003126425 |
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| Protein GI | 256425772 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1331] Highly conserved protein containing a thioredoxin domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.155971 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.536892 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAC TATCACTCCT ATTCTGTACA TGCCTGCTTA CGGGCGCCAT TACAACAGGG
TATGCTCAGC AGAGCAACCG AAAACAGGAA CTCATTGCTA CTGCCAACAA AACGCTGGAC
TTGGCAGTAC GTCAGTACAA GCTGATGATG CAGCATGTGC CTGACAGCGT ATTGCCACGT
ACAACCAATA ATGAAGATGG CAGTTTTGTT ACAGCAAAGA CGAATTGGTG GACCGCAGGT
TTTTATCCCG GTACACTGTG GTATTTGTAT GAATATTCCA AAGATAATAC CCTGAAGCAG
GAAGCATTGA AACGTACGGC ACAGGTGGAG GTAGAGAAGA ATAATAAAGG GACGCATGAC
CTTGGATTTA TGTTGTATTG CAGCGCAGGA AACGCATATC GTATTACTAA AGATCCGAAG
TATAAAGAAG TGTTGCTGAC AAGTGCGCGT TCCTTGTCTA CCCGCTTTAA TCCCAAAGTA
GGTTGCATCA AATCATGGGA TCATGGCAAA TGGCAGTTTC CGGTGATCAT TGATAATATG
ATGAACCTGG AGTTGCTGAA CTGGGCGACC CGTGTGAGCA AGGATCCTTC TTTTGACCGT
ATTGCACGTA CACATGCGAA TACAACTATT AAACATCATT ATAGAAAAGA CTACAGTTCT
TATCATGTAA TTGGTTATGA CAGTACCACC GGTGCTGTAC TGGCCAGAAA TACAGCACAG
GGTGCAAATG ATACATCTGC CTGGTCCCGT GGACAAGCAT GGGGCCTGTA TGGTTACACC
ATGATGTATC GTGATACCAA AGACAAAGCT TATCTGGCAC AGGCGCAGCA TATTGCTGAT
TATATCCTGA ATCATCCGCG TATGCCGGAA GATCTGATCC CTTACTGGGA CTACGATGCG
CCTGGCATTC CGAATGCACC GAGAGATGCT TCAGCAGGTG CGGTAGCAGC ATCTGCATTA
CTGGAACTGA GCCGTTACAC GAAAGGGGCG ACTTCCACAC GTTACTGGAA TGCTGCGGAG
AAAATGCTGG AAAGTCTGGC GAGTCCGGCT TACCTGGCGA AAGAGGGAGA GAATAACAAC
TTCATCCTGA TGCACAGTGT AGGATCCATT CCACATAAAT CAGAAGTGGA TGTACCACTG
ACTTATGCAG ATTATTACTT TGTAGAAGCA CTATTACGGT ACAAGCAATG GGCTAAATAA
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| Protein sequence | MKKLSLLFCT CLLTGAITTG YAQQSNRKQE LIATANKTLD LAVRQYKLMM QHVPDSVLPR
TTNNEDGSFV TAKTNWWTAG FYPGTLWYLY EYSKDNTLKQ EALKRTAQVE VEKNNKGTHD
LGFMLYCSAG NAYRITKDPK YKEVLLTSAR SLSTRFNPKV GCIKSWDHGK WQFPVIIDNM
MNLELLNWAT RVSKDPSFDR IARTHANTTI KHHYRKDYSS YHVIGYDSTT GAVLARNTAQ
GANDTSAWSR GQAWGLYGYT MMYRDTKDKA YLAQAQHIAD YILNHPRMPE DLIPYWDYDA
PGIPNAPRDA SAGAVAASAL LELSRYTKGA TSTRYWNAAE KMLESLASPA YLAKEGENNN
FILMHSVGSI PHKSEVDVPL TYADYYFVEA LLRYKQWAK
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