Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_6800 |
Symbol | |
ID | 8362992 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 8517989 |
End bp | 8520325 |
Gene Length | 2337 bp |
Protein Length | 778 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 644968933 |
Product | Alpha-L-fucosidase |
Protein accession | YP_003126402 |
Protein GI | 256425749 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000092205 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.0000000000000164312 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGAAGATCT TAAAGAAACA CGTTATTACC GCTATTGTCA TGATGATGCC TGCTGCCCTC TGTAAAGCGC AGCAAAATCC GCTAACACTG AAATATGACA AGCCGGCGGC AGTCTGGGAA GAAACATTAC CCCTTGGAAA TGGACGACTG GGCATGATGC CGGATGGTGG CATTCAGACA GAAAAAGTTG TACTGAACGA CATCACCTTA TGGTCAGGGG CTCCACAGAA CGCCAATAAT TACGAAGCCT ACAAGCAGCT GCCGAAGATA CAGGAATTGC TGAAAGAAGG CCGTAATGAC GAGGCACAGT CGCTGATGGA CAAAGACTTT ATCTGTACCG GTAAAGGCTC AGGAGACGTC CCTTTTGGCT GTTACCAGAC ATTGGGAGAA CTACAGATAC AGTTTGCCTA TGACAAGGCC GACAAAGTGG AGCCAACTGC CTATGAAAGG AAATTATCCC TGCAACAGGC AATTGCTTCC TGTAGTTATA AAGTAAATAA CGTGACCTAT AACAGAGAGT ACTTCACCAG TTTTGGAGAT GACTTGTCTT TTATCCGGCT CACAGCCAGT CAGGCTGGTA AGCTGAACCT GCGTATCACT ATGAGTCGTC CGGAAAAAGC AGCCACCCGC ACTGAAAATG GCGAACTGCT GTTGTACGGG CAGCTGGACA GTGGTAACGA TACAAAAGGT ATGCAATACC AGGCAAACGT AAAAGCACAG TTGAAAGGTG GAACGATCAC TACGGAAGAA CATGCACTGG TGATCAAAAA TGCGACAGAA GTGATACTGT ATGTCGCAGC CGGTACTGAT TTTCATAAAA ATGATTTCAA AAAGCAGATC AGCACCGTGC TGGCGACTGC TGTAAAAAAA CCTTATGAAG CTCAGAAACA GGCGCATATG CGTAATTACA CGAAACTCTT TAACAGGGTA CAGGTTGATC TTGGTAAAGG AACGGCAGGT ACGCTGACAA CTGATAAAAG ATTAGCCGCA TTTTATAACA ATGCGGCTGC CGACAATGAG TTACCGGTAC TGTTTTATCA GTTTGGCCGC TACCTCACTA TCTGCAGCAC CAGGAAAGGA TTATTACCGC CGAATTTACA AGGCTTATGG GCGAACCAGG TACACACTCC CTGGAACGGT GATTACCACC TGGACGTCAA TGTACAGATG AATCACTGGC CGGTGGAAGT ATCCAACCTC TCTGAACTGA ACCTGCCCCT GGCAGACCTC GTAAAAGGAC TGGTAGCACC AGGTCAGCGT ACTGCAAAAG CGTATTACAA TGCACCAGGA TGGGTAGCCC ATGTTATTAC GAATGTATGG GGCTTTACCG AACCGGGAGA AAGCGCTTCC TGGGGTGCTA CTAAGTCTGG CTCCGGCTGG CTGTGTAATA ACCTTTGGGA ACACTACGCC TTCACCAACG ATAAAAAATA CCTGGCGGAT ATCTACCCGG TACTGAAAGG ATCTGCAGAA TTTTATAACA GTCTGCTGAT AAAAGACGAA AAAACCGGCT GGCTGGTGAT GTCGCCTTCT TCTTCTCCCG AAAATGCATT TTACCTGCCA AACGGTAAAC ATGCCAGTAT CTGTATCGGC GCTACTATTG ACAACCAGAT CGTACGTGAC CTGTTCAACA ATATTATCAC CGCCTCTACT GAACTGGGTA TCGACGCTGA CTTCAAAAAA GAACTGCAAC AAAAGGTAGC CCTGCTGCCT CCTCCAGGTG TAATCGCGCC GGATGGCAGG ATCATGGAAT GGCTGGAAGA TTATAAAGAA ACTGAGCCAC AACACAGACA TATTTCACAC CTCTGGGGAT TGTACCCTGC TTCTCTGATC ACCGCAGAAA ACACGCCTGA TCTGGCAGCA GCAGCAAAAA AAACACTGGA AGTAAGAGGA GATGACGGAC CAAGCTGGAC GATCGCTTAT AAACTCCTGT TCTGGGCAAG ATTACAGGAT GGTAACCGCT CTTTCAAACT GCTGAAGGAA CTGCTTAAAC CAACTGCCAG AACGGATATC AACTATGGTG CAGGTGGTGG TGTATACCAG AATATGTTAT CTGCCGGTCC GCCGTTCCAG ATAGATGGTA ACTTCGGCGC AACAGCTGGT ATCGCAGAAA TGCTGATACA AAGTCATGCA GGATTTATCA ACATCCTGCC TTCCATTCCT GACCAGTGGA AAGCAACAGG ATCTGTAAAA GGATTAAAAG CCAGGGGCAA CTTTACAGTA GACTTTGCAT GGAAAGATGG TAAGGTAACG TCTTACCGTA TCCTTTCTCC TACTCCACGC AAGGTGAAAG TAAAAGTCAA TGGCGCTATA AAAGAAATCA CAGCCAGCAA AGGCTGA
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Protein sequence | MKILKKHVIT AIVMMMPAAL CKAQQNPLTL KYDKPAAVWE ETLPLGNGRL GMMPDGGIQT EKVVLNDITL WSGAPQNANN YEAYKQLPKI QELLKEGRND EAQSLMDKDF ICTGKGSGDV PFGCYQTLGE LQIQFAYDKA DKVEPTAYER KLSLQQAIAS CSYKVNNVTY NREYFTSFGD DLSFIRLTAS QAGKLNLRIT MSRPEKAATR TENGELLLYG QLDSGNDTKG MQYQANVKAQ LKGGTITTEE HALVIKNATE VILYVAAGTD FHKNDFKKQI STVLATAVKK PYEAQKQAHM RNYTKLFNRV QVDLGKGTAG TLTTDKRLAA FYNNAAADNE LPVLFYQFGR YLTICSTRKG LLPPNLQGLW ANQVHTPWNG DYHLDVNVQM NHWPVEVSNL SELNLPLADL VKGLVAPGQR TAKAYYNAPG WVAHVITNVW GFTEPGESAS WGATKSGSGW LCNNLWEHYA FTNDKKYLAD IYPVLKGSAE FYNSLLIKDE KTGWLVMSPS SSPENAFYLP NGKHASICIG ATIDNQIVRD LFNNIITAST ELGIDADFKK ELQQKVALLP PPGVIAPDGR IMEWLEDYKE TEPQHRHISH LWGLYPASLI TAENTPDLAA AAKKTLEVRG DDGPSWTIAY KLLFWARLQD GNRSFKLLKE LLKPTARTDI NYGAGGGVYQ NMLSAGPPFQ IDGNFGATAG IAEMLIQSHA GFINILPSIP DQWKATGSVK GLKARGNFTV DFAWKDGKVT SYRILSPTPR KVKVKVNGAI KEITASKG
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