Gene Cpin_6773 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_6773 
Symbol 
ID8362965 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp8484312 
End bp8484650 
Gene Length339 bp 
Protein Length112 aa 
Translation table11 
GC content48% 
IMG OID644968906 
Producthydroxyisourate hydrolase 
Protein accessionYP_003126375 
Protein GI256425722 
COG category[R] General function prediction only 
COG ID[COG2351] Transthyretin-like protein 
TIGRFAM ID[TIGR02962] hydroxyisourate hydrolase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCGGA TCACCACACA TATACTGGAT ACTTCCGCAG GCCTTCCAGC ACAAGGCGTG 
GCCGTTCATC TTTTCCAACA ACAGGAAGAA GACTGGACGG CCATCGCCTC CGGTCATACC
AATCAGGATG GCAGATTAGC CGGTCTGCTG CCTGATGAAG CAATATTAGC TGCCGGTGTG
TATAAACTCA GGTTTGAAAC ACAAACCTAT TTCGACACCC GTGGGATCAA CAGCTTCTAC
CCTTTTGTAG AAGTTGTTTT CTTTATCCGC GATCAGCAGC ACTACCATGT TCCCCTGTTG
TTAAATCCCT TTGGTTATTC CACCTATCGT GGTACATAA
 
Protein sequence
MSRITTHILD TSAGLPAQGV AVHLFQQQEE DWTAIASGHT NQDGRLAGLL PDEAILAAGV 
YKLRFETQTY FDTRGINSFY PFVEVVFFIR DQQHYHVPLL LNPFGYSTYR GT